Brassica napus (rape): 106346179
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Entry
106346179 CDS
T04128
Name
(RefSeq) exocyst complex component SEC8-like isoform X1
KO
K06111
exocyst complex component 4
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106346179
Membrane trafficking [BR:
bna04131
]
Exocytosis
Tethering complex
Exocyst complex
106346179
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec8_N
Vps54_N
EXOC6_Sec15_N
Sec8_C
Motif
Other DBs
NCBI-GeneID:
106346179
NCBI-ProteinID:
XP_013640889
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All DBs
Position
C1:49034563..49043387
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AA seq
1044 aa
AA seq
DB search
MGIFDGLPVPSDKSYLRDELARIDESWAVARFDSLPHVVHILTSKDRATDVLLLKEQSDV
VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKLGDLKHDLAEAKRSLGTRNKQLHQ
LWYRSVTLRHIIALLDQIEGIAKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG
ALQDVRSELTKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDDVPTTTAVAASRMS
SQPLSRRTRTLKGDSQFGVRGLTNGSHRTSSIEEGSSFDGHDEDSVEHDEATDSKLLSHQ
LPPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIICQKLRPTIHEI
IISKIKAHMETRNLSKFACIQGDQTVAAGLHFVKGQPEAYRLSKEKPQNGISNSGTHLAV
SPVSPLMVPGGKAQAAAKDLLDSILDTIVKIFENHVVIGELFELKASQHDINTPKSLPTN
VNWNIDSEASQVTGGYTISYPLTVLQSECQQLICEILRATPEAASADAAAQTAKGAKKAS
KKDKRNAPEDGLTFTFRFTDATISISNQGADLIRQGWGMKAPNSSQEGYGSAAVLPEQGI
YLAASIYRPVLQFTDKITSMLPKKHSQLVIDGLLTFTENFVKDHLLPTMFGDYRKGVQQA
ISSAAAFRPRAHTTTYTPTVEKGRPILQGLLAIDLLAKEVLGWAQAMPKFATDLVKYVQT
FLERTFERCRTSYMEAVLEKLSYRLIGRHDIEKLMRLDPASACLPALLGHSVSHSEAVGS
DVELCELFLSLPSIKQDNLIRDDNKLILLASLSDSLEYVADSIERLGQAVPRAASQSEDN
SRNQATSPRNLASFADEYRKLATDCLKVLRVEMQLETVFHLQEMTNREYLEDEDAEEPDD
FVISLTSQITRRDEGMAPFISGEKRNYVFGGICGIAANASIKALADMRSINLFGVQQICR
NTIALEQAMAAIPYIDGESVQQNLDRVRTYFELLNMPFEALLAFIAEHDQMFTPTEYSNL
LKVNVPGRDTPTDAQSRLSEILSH
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggggattttcgacggtttgcctgttccctcggataaaagctaccttagggatgagctg
gcacgaatagatgagagctgggctgttgcacgcttcgactctttgccacatgtggtccat
atcctcacctcaaaagaccgtgcgactgatgttcttttactaaaggaacaaagtgatgtt
gtcgaggaggttgtggatgaagttgtgcatgcttatcatggtggtttcaacaaggccatt
caaaactactcacagatcttgcgattgttcagtgagtccactgaaaaattaggcgacttg
aagcatgatttggcagaagcaaagaggagcttgggtacacgcaacaagcagttgcaccag
ctgtggtaccgttctgtaacattgcggcacatcatcgcacttttggatcaaattgagggc
attgcaaaggttccatctcgtattgagaagctcattgctgataagcagttttacgctgct
attcaagtgtatcttcagtcgtctctgatgcttgagcgtgaggggcttcaaacggttggt
gctcttcaagatgtcagatctgagctaactaagctgcggggagcccttttctttaaaatt
ctagacgatttgcatgcacatctatacaacagaggtgaatacagttcagttgcgtcaagc
atatacgaaagagatgatgatgtaccaacaacaacagctgttgcagctagtcgaatgagc
tcacaaccactgtctcgtagaacacggacactgaaaggtgatagtcagtttggtgttaga
gggctcacaaatggttcacatagaacgtcgtctattgaggaaggttcatcatttgatgga
catgatgaggactctgtcgaacatgatgaagctactgatagtaaactgctttctcaccaa
cttccgccatggctttctgattccacgcctgacgagtttattgaagcagtaagaaagagt
gatgatccacttcatgtgaagtatctacagacccttgttcagtgtctctgcatgcttgga
aaagttgcagctgctggtgctatcatatgccaaaaacttcgacccacaatacatgagatc
attatatccaagattaaagcccatatggagactagaaatttgtcaaaattcgcctgtatt
cagggtgatcaaacggtagcggcaggattgcattttgtcaaaggacaaccagaggcctac
agactatcgaaagagaaacctcaaaacgggatatcaaattcaggaactcacctggctgtg
agccctgtttcgcctcttatggttcctggagggaaggcgcaagctgcagcaaaagacctt
cttgactcaattttagatactattgtcaagatatttgaaaatcatgttgttattggagag
cttttcgagttgaaggcttcacaacatgacattaacacaccgaagtcgctgcctacgaat
gtgaactggaatatcgattctgaagcatcccaagttactggaggctacactatcagttat
cccttgacagtcttacagagtgaatgccagcaactcatatgtgagattctacgagcaact
ccagaagctgcttcagcagatgctgctgcacaaactgctaaaggtgcaaagaaggcttcc
aaaaaagacaaaaggaatgcacctgaagatgggctaacattcacctttcggtttacagat
gcaactatatcgatttctaatcagggagctgatctaattcgccaaggctggggaatgaag
gctccaaattcatcacaggaaggttatggttctgcagcagtattgcctgaacagggaata
tatctagctgcatctatataccggcctgtccttcagtttacagataaaatcacttcaatg
ttgcccaaaaagcattcccagcttgtgattgatgggttgcttacattcactgagaacttt
gtgaaggaccacctgttaccgacaatgtttggggactataggaaaggcgtacagcaagct
atatcaagtgccgccgcatttagaccacgtgcacatacaactacttacaccccaaccgta
gaaaagggtcgtcctatcttacaaggacttttggcaatagatctccttgcaaaagaggtt
cttggttgggctcaagccatgccgaaatttgctactgaccttgtgaagtatgttcagaca
tttcttgagagaacatttgagagatgtcgaacatcatacatggaggctgtgctagagaag
ctcagttacaggcttattgggaggcatgatattgagaaattgatgcgacttgatccggcg
agtgcttgtttgccagctctacttggccattctgtttctcactctgaggctgttggctcc
gacgtagaactctgtgaactattcttaagtttgccgtctatcaagcaggataatctaatt
cgtgatgacaacaaactgattttgttagcctctcttagcgactctcttgaatacgtagca
gactctattgagaggcttggacaagcagttcctcgtgcagcaagtcaatctgaagataat
agcaggaatcaagcaacttctcctaggaatctggcatcatttgctgatgagtacagaaaa
cttgcgactgattgcctaaaggttcttcgtgttgagatgcaactggagacagtctttcat
cttcaggaaatgacgaaccgggaatacttggaggatgaggatgctgaagagcccgacgac
tttgtgatttctcttacttcacagataacacgtagggacgagggaatggcgcctttcatc
tctggtgagaagcgcaattatgtttttggcggcatttgtggaattgcagcgaatgcgtcc
attaaggctttggctgacatgagatcgataaacctttttggagttcaacaaatatgtcgg
aacactattgcattggaacaggccatggcagctattccatatatcgatggtgagagcgta
caacagaacctagatcgtgtccgtacatactttgaactactaaacatgccatttgaggcg
ttgcttgcattcatagcggaacatgaccaaatgtttacacccacagagtattctaatctt
ctaaaggtgaatgttcctggaagagatactcctacagatgctcaatctcgcctttctgaa
attctttctcactaa
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