Brassica napus (rape): 106346202
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Entry
106346202 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106346202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106346202
03036 Chromosome and associated proteins [BR:
bna03036
]
106346202
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106346202
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106346202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
106346202
NCBI-ProteinID:
XP_013640918
LinkDB
All DBs
Position
A6:complement(4005087..4010721)
Genome browser
AA seq
1028 aa
AA seq
DB search
MFGSSNPFGQSSSSSPFGSQTQSLFGQTSNSSSNNPFAPATPFGASAPFGAQTGGSIFGG
TSTGVFGAPQASSPFGSTPTFGASSSPAFGNSTPAFGASPASSPFGGSSAFGQKPLGFST
PQSNPFGSTTQQSQPAFGNSTFGSSTPFGATSTPAFGASSTPSFGATSTPSFGASSTPAF
GATSTPAFGASNQHTFGATNTPAFGASPTPAFGGTGTTFGNTGFGASSTPAFGASATPAF
GASSTPAFGSSSTPAFGASSTPTFGASNTSSFSFGSSPAFGQSTSAFGSSAFGSTPSPFG
AQGGQASTPTFGSSGFGQSPFGGQQQAGSRAVPYAPTVEAETGSGAPAGKLESISAMPAY
KEKSHEELRWEDYQRGDKGGPLPAGQSAGNTGFGASPAQPNPFSPSPAFGQTPANPTNPF
SSSTSTNPFAPQAPTIASSGFGTATSNFGSSPFGVTSSSNLFGSTSSTTTSVFGSSPAFG
TTTSSPLFGSSPSIFGSTPVQGATPAFGNTQSSNLFSSNPSIGQTGSTFGQTGSAFGQTG
STFGQTGSTFGQFGQSSAPAFGQTNIFNKPSTGFGNLFSSSSTLTTSSNSPFGQTMAAGM
TPFQSSQPGQASNGFGFNNFGQTQAANATGNAGGLGFFGQGNFGQTPAPPSSVVLQPVPV
TNPFGTLPAMPQISINQSGTSPSIQYGISSMPVVDKPVPVRISSLLTSRHLLQRRARLPA
RKYRPGDNGPKVPFFADDEENSSSTPKADALFIPRENPRALVIRPVQQWSSRVKSTIPKD
RPIAPVQENGKSSEIATDAANHVKNDNGEVGSAEERTRPFVNGNQKSNGATSTDHAGEID
RPSRILGGHRAGKAAVVYENGADIEALLPKLRQSDYFTEPSIRELAAKERADPGYCRRVR
DFVVGRQGYGSIKFMGETDVRRLDLETLVQFNNREVIVYLDESKKPAVGQGLNKPAEVTL
LNIKCIDKKTGKQFTEGERVEKYKMMLKRKAEAQGAEFVSFDPVKGEWKFRVDHFSSYKL
DDEDDDEA
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcatctaatccttttggacagtcatctagtagcagcccgtttgggtcccaa
acccaatctttgtttggtcagaccagcaattctagtagtaataatccttttgctccagca
acgccgttcggcgcgtctgcaccttttggtgcgcagacagggggttcaatatttggtggc
acttcaaccggtgtttttggtgcacctcaagcctcctctccgtttggctccaccccaact
tttggagcttcttcatcaccagcgtttgggaattccactccggcctttggagcatctcca
gcatcttcaccttttggtgggtcttctgcttttgggcagaaaccactgggattctcaaca
cctcagtcaaatccttttggaagcacaacacagcaatcgcaacctgcatttggaaacagc
acttttggttcatccacaccttttggtgccacgagcactcctgccttcggtgcatcaagc
actccttcctttggggctacaagcacaccctcatttggtgcatcaagcacgcctgccttt
ggtgctacaagcacacctgcctttggcgcctcaaaccaacataccttcggcgccacaaac
acacctgcatttggtgcttcaccgactccagcctttggtggcactggtaccacgtttggc
aacactggctttggagcttctagcactcctgcttttggtgcatcagccactcctgctttt
ggtgcatcaagtactcctgcctttggttcatcaagtactcctgcctttggagcatctagt
actcctacttttggtgcatcaaacacctcatccttcagttttggctcctctccagctttt
ggccagtccacatcagcgtttggcagcagtgcatttggctctacaccatctccctttgga
gcccaaggtgggcaggcttcaaccccaacatttgggagttctggttttggtcaatcacct
ttcggtggtcaacaacaagcgggcagtcgagccgtgccttatgcaccaacagttgaggca
gagacaggcagtggtgcgcctgctggaaagttagaatctatttctgccatgccggcatac
aaagaaaaaagccatgaggagctaaggtgggaagactaccagcgaggagataaaggtgga
ccgcttcctgctggccagtctgctggaaatactggatttggtgcatcacctgctcagcca
aatcctttttctccatcaccggcgtttggtcagacaccagcaaatccaacaaaccctttt
tcgagctcaacgtccactaatccttttgcccctcaagccccaacaattgccagttcaggt
tttggaacggctacctcaaattttggttcctcgccctttggtgtaacatcttcatccaat
ctttttgggtcaacttcatcaactaccacatccgtctttggatcatcccccgcttttgga
acaaccacctcatcaccgttatttggttcttctccatcaatatttggttcaactcctgtt
cagggggcaactccagcatttgggaacactcagtcatctaatctgttcagctcaaacccc
tcgatcggacagactggctctacatttggacagactggttctgcatttggacagactggt
tctacctttggacagactggttctacctttggacagttcggacagagtagtgctcctgca
tttggccaaactaacatcttcaataaaccttccactgggtttggcaacttgttttcaagt
tcttcaacattaactacgtctagcaactctccctttggacaaacaatggctgctggtatg
acacctttccaatcatctcagccaggtcaagcgtcaaatggctttggtttcaacaacttc
ggtcaaacacaagcagctaatgcaactggaaatgctggtggactgggattttttggtcaa
ggcaacttcgggcaaacgcctgctccaccgagctctgttgttttgcaacccgttcctgtt
accaacccatttggaacacttcctgctatgcctcagatctcaataaaccaaagtggaact
tcaccttcaattcaatatggaatctccagcatgcctgttgttgacaaacctgttcctgtt
agaatatcatctctcttgacttctagacaccttttacaaaggcgggccaggttgccggca
agaaagtatcgtcctggcgacaatggtccaaaggttccattcttcgctgatgacgaggag
aactcctcaagtacaccaaaggcagatgctcttttcattccgagggagaaccctagagct
ctagttatacgcccagttcaacagtggtcttcaagggtcaaatctacaattccaaaggac
cgccccattgctccagtacaagaaaatgggaagagttcagaaatagctactgatgcggca
aaccacgtcaaaaatgataacggagaagttggttctgctgaagaaaggactcggccattt
gtcaatggaaatcagaaatcaaacggcgcaacaagcacagatcacgctggagagatagac
cgtccctccagaatactaggtggacacagagccggaaaggccgcagttgtctacgagaac
ggtgcagatatcgaggcgctattgcctaagctacgccaatccgattatttcacggagcca
agtatccgggaactagcggctaaggaaagagccgatcctggttattgcaggcgggttaga
gacttcgtggtgggacgacaaggttatgggagcataaaattcatgggagagactgatgtt
cgtagactagacttagaaactctggtgcagttcaataaccgggaagtgattgtgtacctg
gacgagagcaagaaaccggcggttgggcaagggttgaataaaccggcagaggtaacattg
ctgaatataaaatgtattgataagaagacagggaaacagtttactgaaggagagagagtg
gagaagtataagatgatgcttaagaggaaagctgaggcacaaggagctgagtttgtgtcg
tttgatcctgttaaaggggagtggaagtttagggtcgatcattttagttcctataagcta
gatgatgaagacgacgatgaagcttag
DBGET
integrated database retrieval system
