Brassica napus (rape): 106346230
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Entry
106346230 CDS
T04128
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
106346230
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
106346230
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
106346230
NCBI-ProteinID:
XP_013640950
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Position
A6:complement(3806744..3810627)
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AA seq
671 aa
AA seq
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MKKLADRLLHRLTNHETASNADHHWTGEGTSSLRHRQDRRMPLQGVRLHISDRYVVMDNG
ILQVTLSNPGGIITGINYNGVDNVLEVRNKETNRGYWDLHWNEPGGKGIFDVISGESFRV
IVESEEQVEISFLRTWNPSLEGKYIPLNIDKRFIMLRGSSGVYSYGIYEHLKEWPGFELG
ETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDYQEASLLTAPCDPHLQGEV
DDKYQYSCENKDLRVHGWISFDPPVGFWQITPSNEFRSGGPLKQNLTSHVGPTTLAVFHS
THYAGKTMMPRFECGEPWKKVYGPVFIYLNSTANRDESLFLWDDAKIKMMAEVERWPYSF
VASEDYPKSEERGTARGRLLVCDRFVSNDLISAQGAYVGLAPPGDAGSWQIECKGYQFWA
ITDEAGYFSIDNVRPGEYNLYAWVPGFIGDYHNNIVVSVTSGCKIEMGDIVYEPPRDGPT
LWEIGIPDRKASEFFIPDPDPTLVNRVLVHPQDRFRQYGLWKRYTDLYPNDDLVYTIGVS
DYRRDWFFAHVPRKKGDVYEGTTWQIRFKLENVDQKANYKLRVAIASATLAELQVRVNDA
DATRPLFTTGLIGRDNSIARHGVHGVYMLYTVNIPGNRFVQGDNTIFLKQPRCNGPFQGI
MYDYIRLEGSP
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactcgctgatcggctcttgcatcgtttaaccaaccatgaaaccgcttccaac
gccgaccaccactggacaggtgaaggtacaagtagtcttagacatagacaggatcgcagg
atgcctcttcaaggtgtccggcttcatatcagtgaccgttatgttgtgatggacaatgga
atcctccaagttacactttcgaatccaggtggtatcatcaccgggataaattataacggt
gttgacaatgtgctcgaagttcgtaacaaggagaccaatagagggtactgggacctgcac
tggaatgaaccaggaggcaagggaatatttgatgtcatcagtggagagagtttcagggtg
atagttgagtctgaagagcaggtcgagatctcatttctaagaacatggaatccatccctt
gaggggaagtacattcccttgaatatcgacaaaaggtttataatgctccgtggctcttct
ggagtttactcatacggcatttatgaacaccttaaagagtggcctgggtttgaacttggg
gaaacaagaatcgccttcaagctcagaaaagacaaattccattacatggcggtggcagat
gacaggaaaaggataatgccttttccagatgatctatgcaaaggaagatgccaaactcta
gattaccaggaagcttccttgctcactgctccgtgtgatccacacctacaaggcgaagta
gatgacaagtatcaatactcatgtgagaataaggatctgagagtacatggatggatatcc
tttgatccgccagtaggtttctggcaaattacgcccagtaatgagtttcgatctggtgga
ccactcaaacaaaaccttacctcacatgttggcccaaccactcttgcagtgtttcatagt
acacactatgcgggaaaaacaatgatgcctcgctttgaatgtggtgagccttggaagaaa
gtctatggccctgttttcatttacttaaactccacagctaatagagatgaatcactcttc
ttatgggatgatgctaagataaagatgatggctgaggttgaaaggtggccttatagcttt
gtggcttctgaggactatccaaagtctgaagaacgtggcacggcccgtggtagattactt
gtttgcgataggttcgtaagcaatgatttgatttcagcacaaggtgcttatgtgggtctg
gctccacctggtgatgctggttcctggcaaatagaatgcaagggataccaattttgggcg
ataacagatgaggctggctacttttccatagacaatgtgcgtcctggcgagtacaatctc
tatgcatgggtccctggctttattggagattatcataacaacattgttgtttctgtgact
tcagggtgcaagattgaaatgggtgatatcgtctatgaacctccaagagatggacctacc
ttgtgggagatcggcatccctgacagaaaagcttcggagttctttatcccagatcctgat
cccacacttgttaacagagttttagtccatcctcaagacaggtttaggcaatatggtttg
tggaagagatacacagatttgtatccaaatgatgaccttgtttacactattggtgtaagt
gattatcgtagagactggttctttgctcatgttcctaggaagaaaggagatgtgtatgaa
ggaacaacttggcagattcggtttaaactagaaaacgttgatcaaaaggcgaattacaaa
ctgcgtgttgcaatagcatctgcaaccttagcagagttgcaggtgagagtcaatgatgct
gacgcaacacgtcctctgttcacaaccggacttatagggagagacaactcgattgcaagg
cacggtgtccacggggtttacatgctgtataccgttaacataccgggaaaccggtttgtg
caaggggataacacaatcttcctgaaacagccaagatgcaatggtccctttcaagggatt
atgtatgactacattcgtcttgaaggctctccttaa
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