Brassica napus (rape): 106346328
Help
Entry
106346328 CDS
T04128
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106346328
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
106346328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
106346328
NCBI-ProteinID:
XP_048593877
LinkDB
All DBs
Position
A1:complement(24025605..24031986)
Genome browser
AA seq
1103 aa
AA seq
DB search
MTTPARPLSVHDWDVLIEDFQDSGAPRDWFTSVFSTDSLPDLALSSLLKKEFPLPSKLSI
LVFLDEFSETLFHKRGDETFDRLVDALRAIVQSPTDGSNGLKEQALISFTSVLVAVGSFS
VRHVEAVVDLLLALVNRPNHGFDRQARAVACECLRQLERAFPGLLSDVAGHLWSLCQAER
THAVQAYLLLFTTVVYNVVNQKLKVSLLSTSVPLVPFNAPPNLGQSLGLGPDQKELRRTL
AFMLESPYLFTSCAMMEFMGMVVPLASALELQASMLKVQFLGMIYSFDPMLCHVVLLMYT
QFPDAFEGQEKDIMRRLMLLSKETQIYLAFRLLALHWLMGLFNKVMLSGEVGKRKSVLEM
GRKFHPGVFDPLALKALKLDMLVQCYVGLSGGGDNGKSAGELLQECLVSVSDFKWLPPWS
SETGVAFRTLHKFLLSASTHSDSDPSTTRSLMESSLFQNLQGLLVDMTSKFPILVPVIVS
FIERLINCEKHQWLGERFLQTIDEKLLPKLEKSCLLTAYFPLLHRIAENDTIPPSRLIEL
LTKFVLTLVDKRGFDVGLKLWDQGTEVLGICRTLLSHHKSSRLFLGLSRLLSLMCLYFPD
LDVRDNARIYLRMLVCIPGRRLKNILKPADTVSPSTHSSAFFTVQSPRFRHDPNKSWNLS
SYIHLERVTSLLVKQSWSLSLPSLGVGNDGYSVIERKVQVDEVETDSSSQELLQLLPESR
RIESGKPTLRVMDAKIAEILERLRRYFSVVPDLRHMPGIKVRINCTLRLDAEPYSSIWGS
QTQSPELDKVDSSPPALFATVVKFSSSAPYGSIPSCRIPFLLGEPHWDKNVQGSLDIVLL
GDAPKEEEKDGLGGGASVTVELEPREPTPGLVEVSMEANAENGQMIQGKLESVPVGIEDM
FLKALAPPDEPEDTIPSYYSDLFSALWEVCGSSSSTAHETFALKGGKTAAAISGTRSVKL
LEIPAETVIQASELHLAPFVVAITGEQLVNIVREGGIIENIVWQEEEEEGRGQGTASSSI
GPTGSNRDPLRLTYIGYGDDQEVPMSRSRGKLGKIKMLMFLPPRYHLLFEMEVGEGSTLV
HIRTDYWPCLAYVDDYLEALFLL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgacgactccggcgagacccctctccgtccacgactgggacgtcctcatcgaagatttc
caagactccggcgctcctcgcgactggttcacctccgtcttctccaccgactctctaccc
gacctcgctctctcctccctcctcaaaaaggagttccctttaccatcgaagctctccatc
ctcgtcttcctcgacgaattctccgagactctcttccacaaacgcggcgacgagaccttc
gatcgcctcgtcgacgctctccgcgcgatcgtgcagtctccgacggacggatcgaacggg
ttaaaggagcaggctttgatctccttcacgtcggtgcttgtggcggttggttctttctcc
gtgcgccacgtggaagccgtcgttgacttgctgctcgcgcttgtgaatcgccctaaccac
gggttcgatagacaggcacgtgccgtcgcgtgcgagtgcttacgtcagctcgagagagcg
tttcctgggttgttgtctgacgtcgctgggcatctttggtcgctgtgccaagcggagaga
acacacgccgtgcaagcttaccttctcttgttcacgaccgttgtttacaatgtcgttaat
cagaagctcaaggtttcgcttcttagtacttctgtgcctttggttcctttcaatgctcct
cccaatctgggtcagagtctggggttggggccagatcagaaggagctgagacggacgctg
gcgtttatgttggagtctccgtatctattcacgtcttgtgctatgatggagtttatgggg
atggtggtgccccttgcgtctgcattggagttacaagcctctatgttgaaagttcagttc
ttggggatgatttattcgtttgatccgatgctgtgtcatgttgtcttgcttatgtatact
cagttccctgatgcgttcgagggacaagagaaagatatcatgagacgtctcatgcttctc
tccaaggagactcagatctatcttgctttccgcttgcttgcgcttcactggttgatgggt
ttgtttaataaagtgatgttgagtggggaggttgggaagaggaagtctgtgctcgagatg
ggtcgaaagtttcatcctggggtatttgatccgctcgctttgaaggctttgaagcttgat
atgttggtacaatgctatgttggtttgagtggaggtggtgataacggaaaatctgcaggg
gagttgttgcaggaatgtttggtttctgtttcggatttcaaatggttgcctccttggagc
tcagaaactggtgtagcgttccgtactttgcacaagtttctgctaagtgcttctacgcat
tctgactctgacccttccaccactagaagccttatggagtctagcctcttccaaaacttg
caggggttgctggtggacatgacttcaaagtttccaatcttggtccctgtcattgtgtca
tttatagaacggttgataaactgtgaaaagcaccagtggttaggagagaggtttcttcag
acaatagatgagaagctgcttcccaaacttgagaaaagctgtttattaacagcgtacttc
ccgcttctccataggattgcggagaacgatacaatacctccttctagattgatagagctg
ctcaccaagtttgtccttacacttgttgataagcgcgggtttgatgtggggttgaaacta
tgggatcaaggcactgaagttcttggcatttgtcgaacactgttgagtcaccataagagc
tctagactgtttcttggactctctcgccttctttctctcatgtgtctctatttccctgat
ctagatgtccgagacaacgccaggatatatctgaggatgctggtgtgtataccaggaagg
aggttgaagaacattttgaaacctgcagataccgtctctccatcaacacattcatctgca
ttcttcactgtccagagtcctcgtttccgtcatgatcctaacaaatcttggaacctttca
tcatatattcatcttgaacgtgtcacttccctactagtgaaacagtcatggtccttgtct
ctaccatcactaggcgttggaaacgatgggtatagcgttatagaaaggaaagttcaggtt
gatgaagttgagacggatagtagcagtcaagaactcctccagcttttgccggagtctcga
aggattgagtcaggaaagcccacgttaagagtgatggatgcaaagatagctgagattctc
gaaaggttgaggagatacttctcagtggttcctgatctcagacacatgcctggaatcaag
gtgaggataaactgtactttgagattggatgctgaaccatatagcagcatatggggtagt
caaactcagagtcctgagttggataaagtggactcatcacctcctgctttattcgcaacc
gtggttaaattctcatcttcagcaccttatggctctattccatcttgccgcatacctttc
cttctaggtgagcctcattgggacaagaatgtacaaggctctttggacatagtcttgtta
ggagatgcgccgaaagaggaggagaaagatggcttgggaggaggagcatctgtaacagtt
gaacttgaacctagagagccaacacctggtttggttgaggtttcaatggaagcaaatgca
gaaaatggtcagatgattcaggggaaactcgagagtgtccctgtggggattgaagatatg
ttcctgaaagctcttgctccacctgatgaacctgaagatacaatcccgagctactactca
gatctattcagtgctttgtgggaagtgtgcggttcatcatcaagcaccgcacacgaaaca
tttgcactaaaaggaggcaaaaccgccgcagcaatcagcgggacacggtcagtgaaactg
ctcgaaatccctgcagaaactgttatacaagccagcgagcttcacttagccccctttgtg
gtggctatcaccggagaacagcttgtgaacattgtaagagaaggaggaatcatcgagaac
attgtgtggcaggaggaggaagaagaaggaagaggtcagggtactgcttcttcctcgata
gggccaacaggatctaaccgagaccctctacgtcttacatacataggttatggagacgat
caagaggttccgatgagtaggagtagagggaagttgggaaagataaagatgctgatgttt
ttgccgccgagatatcatctgctgtttgaaatggaagttggtgaagggtcgacattggtg
catataagaacagattattggccttgcttagcttatgttgatgattacttagaagctttg
ttcttgctttag
DBGET
integrated database retrieval system
