Brassica napus (rape): 106346422
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Entry
106346422 CDS
T04128
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
bna
Brassica napus (rape)
Pathway
bna00500
Starch and sucrose metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
106346422
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106346422
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
106346422
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Storage polysaccharide
106346422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
106346422
NCBI-ProteinID:
XP_013641201
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All DBs
Position
A6:4510342..4515322
Genome browser
AA seq
1085 aa
AA seq
DB search
MEMCWQIHRPVSIRLVFHQKGRLKINTCIGFLHPHPKSYSFSSLASLESQYSSNGILHQI
TASADFSRKKQGRMSASGPKSSAPRGFERRTTVGSAQKKTPKKNGEKDSNATSTITNEVL
EISKLPGAKADVEKQSSVVFGERNVLDRSETEVDALLDQELKVERENLHRKEIESLAEET
LLRGDRMFVYPLTAKPDEDIEVFLNITLSTLNKEPDVLIMGAFNDWRWKSFTRRLEKTWI
NGDWLSCLLHIPKEAYKIDFVFFNGQSVYDNNDSKDFCIDVKNGMDKVEFENFLLEEKWR
EQEKLAKEEAEREREEEEKRRIEARKAAIEADRAQAKVETRKRREMLQQALEKAVVSARN
VWYIEPSNFQGGDRVKLYYNKSSGHLANAKEIWIHGGFNNWVDGLSIVEKLVDGEIKDDS
KNGDWWVAEVIVPVRALVIDWVFADGPPEGAFLYDNNSRQEFHALVPLRTPEEAYWSEEE
DLMFRKLQEERRLKEEAMRVKMEKTARLKAETKERTLKKFLLSQKDVVYTEPLEIQAGSS
VTVLYNPSNTVLKGKPEVWFRGSFNRWTHRLGPLPPQKMEAADDGSSHLKTSAKVPLDAY
MMDFVFSEKEDGGVFDNKDGLDYHLPVVGGIAKEPPLHIVHIAVEMAPIAKVGGLGDVVT
SLSRAVQELNHNVDIIFPKYDCIKYNFVKDLQFNRSYHWGGTEIKVWHGKVEGVSVYFLD
PQNGLFQRGCVYGCADDAGRFGFFCHAALEFLLQGGFHPDILHCHDWSSAPVSWLFKDHY
THYGLVKTRVVFTIHNLEFGAGAIGKAMTFADKATTVSRTYAKEVAGNSVISPHLYKFHG
IVNGIDPDIWDPYNDNFIPVPYTSENVLEGKRAAKEELQKRLGLKSSDLPLVGIITRLTH
QKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSTHGDRARLVLTYDEP
LSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSVPVVRKTGGLYDTVFDVDHDKERAQAQ
VLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNSLCKTVMEQDWSWNRPALEYIELY
HSARK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtgttggcagatacacagaccggtgagtatcagactggtgttccatcaaaag
ggtcggctcaagatcaatacttgtattggttttctccatcctcaccccaaatcttactcc
ttttccagtcttgcttcgttggaaagtcaatacagctcaaatgggattctgcatcagatc
acggcaagtgcagatttttcaaggaagaagcaagggagaatgtcagcttctgggcccaaa
agctcagctccaagaggctttgagcgacgaacaacggtgggaagtgctcagaaaaaaact
cccaagaagaacggtgaaaaagatagcaatgcaacttctacaataacaaatgaggtttta
gagatcagtaagttgccaggagctaaagcggatgtggagaaacaaagttctgttgttttt
ggtgagaggaatgtattagataggtcggaaactgaggttgacgctttattagaccaagag
ctaaaagttgaaagagagaatcttcataggaaggaaatagaatcacttgcagaggaaact
ttgttgagaggtgatagaatgtttgtatatcctcttactgcgaagcctgatgaagacata
gaagtgtttctcaacataactctatcaactctgaacaaagaaccagatgttttgatcatg
ggggcgttcaacgactggagatggaaatctttcacgaggagattggaaaagacatggatc
aatggagattggttgtcatgtctccttcatatccctaaagaagcatataagattgacttt
gtgttcttcaacggccaaagtgtttatgacaacaatgactcgaaagatttctgtatagat
gtgaaaaatgggatggataaagtagagtttgagaattttcttctagaagagaagtggaga
gagcaagagaagctagctaaggaagaagctgagagggaaagggaagaggaagagaagaga
agaatcgaagctcggaaggctgctattgaagctgatagagcacaagcaaaggttgaaact
cggaagagacgtgagatgcttcaacaggctcttgagaaagctgtagtctcggctaggaat
gtatggtacattgagccgagtaatttccaaggtggagatagagtgaagctatattacaac
aaaagctctggtcatctagctaatgccaaagagatctggatacatggagggtttaacaat
tgggtcgatggtttatctatcgttgaaaagcttgttgatggtgagataaaggatgattca
aagaacggagactggtgggtcgctgaagtcatagtgccggtccgtgctctagtcattgac
tgggtctttgctgatggaccgcctgaaggagcgtttctgtatgacaacaatagtcgccaa
gagttccacgcacttgttcctctaagaacaccagaagaagcttactggtcagaggaagaa
gatctaatgtttaggaaacttcaggaggagagacggttaaaggaggaagctatgcgtgtc
aagatggagaaaacagctcgtttgaaagcagaaacaaaggaacgaacactcaaaaagttt
ctgctttcccagaaagacgtggtttacacggagcctctagagattcaagcaggaagctct
gtgacagttttgtacaatccttcaaacacggttttgaaaggaaagcctgaggtttggttt
agaggctcttttaatcgttggactcatcgcttgggtcctttgccacctcagaaaatggaa
gcagcagatgatggaagctcacacttgaagacttctgctaaggtcccgttggatgcttac
atgatggactttgttttctccgagaaagaagatggtggagtttttgataacaaagatggt
ttggattaccacttacctgtcgtgggaggtattgccaaggaaccaccattgcacattgtt
catattgctgttgaaatggcacccattgcaaaggttggaggcttaggtgatgtggtcact
agtctatctcgcgctgttcaagaactaaaccataatgtggatatcatatttccaaagtat
gattgcataaagtacaactttgtgaaggacttgcagttcaacagaagctatcactgggga
ggtacagaaataaaagtctggcatgggaaggtggaaggcgtttctgtttacttcttagat
ccgcaaaacggattgtttcagagaggatgtgtttacggttgcgcagatgatgcaggaaga
tttggtttcttctgtcatgctgctcttgaatttcttcttcaaggaggctttcatccagac
attcttcactgtcacgactggtcaagtgctccagtttcatggctgttcaaggatcattac
actcattacggtttagttaaaactcgtgttgtcttcacaatccataatctggaatttggg
gcaggtgccattggtaaagccatgacatttgcagataaagcaactacggtgtcacgaacg
tatgccaaggaagtagctggaaactctgtgatatctccacatttatacaagttccacgga
atagtaaacggtatcgaccctgatatatgggatccgtacaacgataacttcatacccgtg
ccttatacttcagagaacgtgttagaaggcaaaagagcagcaaaggaagaattgcaaaag
aggcttggactaaagagttctgatcttccgttagtagggattattacgcgcttaactcac
cagaaaggaatacatttgatcaaacacgctatttggcgtaccttggaacgcaatggacag
gttgtgttgctaggttcagctccggatcctcggatccaaaatgattttgtgaacttggct
aaccagttgcattctactcatggggaccgtgctcggcttgttctaacctacgatgaacct
ctttcccatttgatatacgcaggggctgactttattcttgtaccgtcgatatttgagccg
tgtggactgacacagctcatagccatgagatacggctctgttcctgtcgttagaaaaact
ggaggactctacgacacggtttttgatgtggaccatgataaagaaagagcacaagcacaa
gttctagaacctaacggcttcagcttcgacggggctgatgctcctggtgtggactatgct
ctcaatagggcgatatcagcgtggtatgatggtagagagtggtttaactcactatgtaag
acggtgatggagcaagactggtcatggaatcgtcctgcgcttgagtacattgagctctat
cactctgcacgcaagtga
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