Brassica napus (rape): 106346492
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Entry
106346492 CDS
T04128
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106346492
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106346492
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
106346492
NCBI-ProteinID:
XP_048614013
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Position
C5:complement(6840319..6842858)
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AA seq
473 aa
AA seq
DB search
MASSTVRNVHGKRSSFQSEFTGNGASKRRNLHDETDRNVIGSEDTVYRYLCPVKKTGSII
GKGGEIAKQIRSETKSNMRINEALPGCEERVVTIYSTSDELNHFGDDGEIVCPALDALFK
VHDMIVAEVDEDDDDDLGDKQTVTVRMLVPSDQIGCVIGNGGQVIQNLRNETNAQIRVIK
DNLPACALTLSHDELLQIIGEPLIVREALYQVASLLHDNPSRFQHSLLSSQSTLMHQPST
ISRRNHAARRDLADATEFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVTTSESEE
DDSIIFISSKEFYEDQSPTVNAAIRLQERCSEKVGKDTNDSTISTRLLVSSSNIGCLIGK
GGAVISEMRSVTRANIRILQKENVPNIAREDEEMVQITGNPDAAMKALTQVILRLRANAF
DMNHGLVLLPTSFPYISQVSGSSNKPKYAKRDGSKDQDYGRLNLNSKRRNHVS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctagtagtactgtaaggaacgtgcatggtaagagatctagtttccaatctgagttt
actggaaacggagcaagcaagagaagaaaccttcacgatgagacagatcgcaatgtcatt
ggttctgaagacaccgtgtaccgttacttgtgccctgttaagaaaacagggagcattatc
ggcaagggcggtgagatcgcgaagcagataaggtccgagacaaagtcaaacatgaggatc
aacgaggctttgccaggttgcgaggagcgcgttgttaccatatattccactagtgatgag
ttgaaccattttggagacgatggggagatcgtttgtcctgctttggatgctcttttcaag
gttcatgacatgattgtagccgaggttgatgaagatgatgatgatgatcttggcgataaa
caaacggttactgtgaggatgcttgtgccttcggaccagataggttgtgttatcgggaac
ggagggcaagtgattcagaatctgcgtaacgagaccaatgctcagattcgtgtcattaaa
gataatctacctgcgtgtgctttgactttgagccatgatgagcttcttcagataattgga
gagcctttgattgtaagagaggctctttatcaagttgcttcacttcttcatgataatccg
tcacgatttcaacactctcttctgtcttctcaaagtacattaatgcatcagccatcaacg
atctctcgcagaaatcacgctgcacgtagagatttagcagatgcaacggagttttgtgtt
tgtttcatctgtccagctgaaaacgtcggaggtgtgataggaaaaggaggtggtttcatc
aatcagatcaggcaagaaactggtgcaaccattagagtcactacctcagaaagtgaagaa
gatgatagcatcattttcatatcatcaaaagagttctatgaagaccaatcaccaacggtg
aatgcagccatacgtttacaagagcgatgcagtgagaaagttggtaaagatacaaatgat
tcaacaatctccactcgtctacttgtgtcgagttccaatatcggatgcctaattgggaaa
ggtggtgctgttatatccgagatgaggagtgtgacacgagctaatatccgtattcttcaa
aaggaaaatgtaccaaatattgctcgtgaagatgaggagatggttcagattacaggaaat
cctgatgcagctatgaaagctcttacgcaagtaatcttacggttaagagctaacgctttc
gatatgaatcatggacttgtcttgctacccacatcttttccatacatctctcaagtatcc
ggaagttcaaacaaacccaaatacgcaaaacgtgatggttccaaagatcaagactacggt
agactgaatttgaattccaagagaagaaaccatgtttcttaa
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