Brassica napus (rape): 106346520
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Entry
106346520 CDS
T04128
Name
(RefSeq) pumilio homolog 6, chloroplastic-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF7999
Motif
Other DBs
NCBI-GeneID:
106346520
NCBI-ProteinID:
XP_048600177
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All DBs
Position
C1:13960922..13964778
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AA seq
807 aa
AA seq
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MRRENPRKATTFKQMATENPIRMSGSNERWSNSVPNRSGSAPPSMEGSFRAVDNLLSRQG
SSGYNNSSFQKQEPLKHNLNRTPSPPVYYPAQYHQFVDNRVGSRFYKVKSPIHLSQGALS
THKEVSEDESSQQLSVISFSDMTNAVEEDLRQDDSSESNSSNGEMNIADESGNVSEISDD
AAAVTRASVVTEKTPDESTIISKMKNVNISGPGTPRYPREPRNARPERQVYQQHNNLTWV
QGGGGKMGYHHGVNDAVNGTGQFHYGQHLLQSPGFKPPPQLYVPTQTAYVTSPTQVYNMQ
SPPVYSPQYGYGPYTNMIPHPQFIPGGYPSHGSVPLIVGPSAGGEMQYAQKFYAPQGQPS
FPDPMYMQYSQQPFGQMELPRGNHKNGPEPQKFVRGIRGPPSNSNMGRMGVNYYGVQSNI
GIMMQYLPAQPGAPLSPGSVPYVEASYPGWRPQGNGPRLCNFLEELKSGKGRRFGLSDIT
GHIVEFSADQHGSRFIQQKLEHCNPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGN
PSQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNG
NHVIQKCIENISADRVGFMLAAFRGQVSSLSMHPYGCRVIQRLLERCANEHQCQFITEEI
LESVCVLSKDQYGNYVTQHVLEKGTSKERERIVRKLSGHIVQLSLHKFASNVIEKCLEHG
GRIERDLIIEEVAGPDESYDSLLMMMKDQYGNYVVQKIFETCTVEQRAALSSRVRMHASA
LKKYTYGKHIVTRLEQPFAEGSRESRR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgagagaacccaagaaaagcaacaacctttaagcaaatggcaactgagaatcct
attagaatgtctgggagcaatgagagatggtctaactctgttcctaaccgaagtgggagt
gctcctccgagcatggagggatcttttcgagccgttgataatctgttgtcacgacagggc
agctccggttataacaactcgagctttcaaaagcaggagcctttgaaacacaacctgaac
cgcacaccttctccacctgtctattaccctgctcagtatcatcagttcgtagacaatcgt
gtaggtagtagattttataaagttaagtctcccattcacttgtcccaaggtgcactttct
actcacaaggaagtgtctgaggatgaaagctctcagcagctatctgttattagtttttcc
gatatgacaaatgctgtggaagaagatttgagacaggatgatagtagtgagtctaactca
tcaaacggtgaaatgaacatagcggatgagagtggtaatgtctcggagatatcagatgat
gctgctgcagtgactagagcttccgttgtcactgagaagactcctgatgagtcaaccatc
atctctaagatgaagaatgtcaacatatctggacctggaactcccagataccctcgagag
ccaaggaacgcaaggccagaaaggcaggtttatcaacaacacaataatctaacatgggtt
caaggcggcggtggcaaaatgggttatcatcatggtgtaaacgatgcggttaacgggacc
ggacagtttcattacggtcaacatctgcttcagtctccaggctttaagccgccgcctcag
ctttacgttccaactcagacagcttatgtgacttcaccaactcaagtctacaacatgcag
tctcctcctgtttactctcctcaatatggttatggaccttacactaacatgatcccacac
ccacagttcatacctggaggatacccttcacatggttccgttccgcttattgtcggtcca
agtgcgggaggtgaaatgcagtatgctcagaagttctatgctccacaggggcagccttct
tttccagatcctatgtatatgcagtacagtcaacagccattcgggcagatggagcttcct
agggggaaccataagaatggtcctgagcctcagaagtttgtccggggaataagggggccg
ccgagtaactctaatatgggtagaatgggtgttaattattatggagtccagtcaaatatt
ggcattatgatgcagtatctgcctgcacagcccggtgctcctctttcaccgggctctgtt
ccctatgtagaggcatcatatcctgggtggcggccacagggcaatggtccgagactgtgc
aattttcttgaagagctgaaatctggaaaaggcaggaggtttggtttatcagacatcaca
ggacacattgttgagttcagtgcggatcagcacgggagccggttcattcagcaaaagctt
gagcattgtaatccagaagagaaagcagctgtctttagggagattctcccacatgcttgc
aaacttatgactgatgtgtttggcaattatgtcattcagaagtttttcgagtacggaaac
ccatcacagagaaaggaactcgcggatcaactcatgggacagatagtaccacttagtctg
cagatgtacggttgtagagttatacaaaaggctcttgatgtcatagaacctgatcagaga
gttcgtttggcacgtgagcttgacggacaggtcatgagatgtgttcgagaccaaaacgga
aaccatgtgatccagaaatgcatcgagaatatctctgcagacagagttggattcatgtta
gctgcattccgtggtcaagtgtcctcgctctctatgcatccttatggctgccgtgtcata
cagaggcttctggagcgttgcgcaaatgagcatcagtgtcagttcatcaccgaggagata
ctggaatcagtatgcgtcctttccaaggaccaatatggaaattatgtcacacagcatgtc
ttggagaaagggacatctaaagaacgtgagagaatcgtgagaaaactatcagggcacatt
gtgcagcttagcctacacaaatttgcatcaaatgttatagagaagtgcctggagcatggt
ggcagaattgagcgggaccttattatcgaagaggttgcagggcccgacgagagctatgat
agtctattgatgatgatgaaggaccagtatggaaactatgtggtgcagaagatattcgag
acgtgtactgttgagcagcgtgcagcattgtccagccgagtcaggatgcacgcttctgct
ttgaagaaatacacatatgggaaacatattgttactcgtttggaacagccctttgctgaa
ggaagccgagaatcgaggcgatga
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