Brassica napus (rape): 106346675
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Entry
106346675 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106346675 isoform X1
KO
K17925
sorting nexin-13
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bna04990
]
106346675
Domain-containing proteins not elsewhere classified [BR:
bna04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106346675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
106346675
NCBI-ProteinID:
XP_013641527
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All DBs
Position
A6:6096537..6101654
Genome browser
AA seq
1019 aa
AA seq
DB search
MSTQKQAATVRDLVEEAKKRIVILVVCVVGLSYLLSLTSSSVLVNLPAAACLIILLRYFS
LDVEMKRKSAAYNNSKPSLSLNKPPELLKAAPRSDWRSKVNSQVVEDAIDSFTRHLISEW
VLDLWYSRITADKQGPEELVFVINGVLGELSRRFRNVNLIDLLTRDLIDIICRRVEIFRE
CQGKIERKQRRSLSFEDRDSELRRVMAADDKLHPALFSPESEHKVLQHIVERLITLTFRP
EDLHCAFFHYTVRELLACCVMRPVLNLVNPRFINERIEAAVISRIKTTDGSSAAKETSQS
EDLSEVSHDPFARYLDPSVTGVELVQLKNEQQKGKKATDKQHVTDLAKDPLLSMDTRSSR
SWNSLPLPSKVVDDIKDLQEHREGEGWGDVLDKMSQRKTETLSPEHLESVWAKGRNYEKK
EGENVVERVPPRWSSKESCNDADDARPKNLSEGTANARGTSQHNVVNRESYLSDYSSAEE
DEGQTKSSHSYTSEDEETVTGLNSPGTRVWDGRTNRNPVVSRIHHPLENSGRRFGKHSKG
DEYYEQAPRHQSSRKRSRRSGHIGNDDSDDSENDSLARSCSGTSATSSASYISVAGSDLP
NALKSSLLVDSFDKLRCEVLGANIVKSSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELH
RRLKVFPEYNLHLPPKHFLSTGVDIPVIQERCLLLDDYLKKLLQLPRISGSIEVRDFLSV
DSQTYAFSSSFSIIETLTVKHVRKTSAVSTNLANVTPGPLLSRENLSSENGKSGQHIKNN
VMVDDLKSKVKAPGNDHTKTSDSDVRNNKENGGLKKGIQHADAVAFTGLPTEWVPPKLTL
PLLDLVDVVFQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKIRILRRGTVVASGIQ
RVEQILWPDGIFITKHPKRQQQSSSSDEEQQQEAERRAKFVRELMIEKAPATIVSLVGQK
EYEQCAEDLYFFLQSSVCLKLLAYDLVELLLTSAFPEMEQSFKQLQEEKHLFGQYTPPT
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacagaagcaggcggcgacagttcgggacctggtagaggaagccaagaagcgg
atcgtaatcctcgtggtatgcgtcgtcggactctcctacctcctctccctgacaagctca
tctgttttggtgaacctccctgctgctgcgtgtttaatcatcctccttcgctacttctca
ctcgatgtcgaaatgaaaagaaagtctgcagcttacaataatagcaaaccttctttatct
ctgaacaaacctcctgaactccttaaagccgctccacgctctgactggagaagcaaagtg
aactctcaggtcgttgaggatgctatagatagcttcactcgtcacctcatttctgaatgg
gtgcttgatctctggtactctcggataacagcggataagcaaggtcctgaggaactggtt
tttgttattaacggtgttctcggtgagctttcacggcggtttagaaacgtaaatctcatt
gatctgttgacgagggatctgattgatattatatgtcgtcgtgtggagattttccgtgaa
tgtcaaggaaagattgagaggaaacaaaggagaagtctcagttttgaagaccgtgactca
gaactaagacgtgtgatggccgctgatgataaattgcaccctgcattgttctctcctgaa
tccgagcataaggttcttcagcatatagtggaaagactcataacgctaacgtttaggcca
gaagatctacactgtgcttttttccattataccgtgagggagcttcttgcttgctgtgtg
atgcgaccagtcctaaatttagtcaatcctcggtttataaatgagaggattgaagctgct
gtgatatcaaggataaagactactgacggttctagtgctgccaaagagacttctcaatct
gaagatctctcggaagtttctcatgatccttttgctagatatctggacccctctgtcaca
ggtgttgagcttgtgcaattgaaaaatgaacagcagaaagggaaaaaggctacagataaa
cagcatgtaacagatttggccaaagatccattgctttcaatggacactcggtcttcccga
tcttggaactccttacccttaccttccaaagtggttgatgatattaaagatcttcaagaa
catcgagaaggagagggatggggtgatgtattagacaagatgtcacaaaggaaaactgag
accctttctcccgagcatcttgaaagcgtgtgggcaaagggaagaaattatgaaaagaag
gaaggtgagaatgttgttgagcgggtgccgcccagatggtctagcaaggaatcgtgcaac
gatgctgatgatgcacggcctaaaaacttgagtgaaggcactgcaaacgcaagaggaacc
agtcagcataatgtagtaaatagagaaagttacttatcagattattcctctgctgaagag
gacgagggccaaacaaagagtagtcattcttatacatctgaggatgaggaaacggtaaca
ggtctaaacagtcctgggactcgagtctgggatggtcgaacgaacagaaatcctgttgtc
tcacggatacaccatccacttgaaaattctggtcgtcgtttcggtaaacacagtaaaggg
gatgaatattacgagcaagcacccagacatcaatctagccggaagagatccagacgttct
ggacacattggcaatgatgatagcgatgattctgaaaatgattctttggctagatcatgc
agtggaacatctgcaacctcgtctgcatcatacatttcagtggcgggaagtgaccttccc
aatgcccttaaaagttctttgttggttgattcctttgacaaattgagatgtgaggttttg
ggtgccaatattgtgaagagtagttctaagatgtttgctgtgtattcagtcgctgtcaca
gatgaaagtaatcatagctggtctatcaaaagaagatttcgacattttgaggagcttcac
cggcggcttaaagtgtttcccgagtacaatcttcatttaccgccaaagcatttcctatca
acaggagtggacatacctgttatccaagagcgatgcctactccttgatgactatctcaag
aagctactgcagctacccagaatttcaggatcaattgaagttcgggacttcctcagtgtg
gattcccagacttatgcgttctcaagctccttctcgatcattgagacgctgacggttaaa
catgtccgtaagacctctgcagtatctacaaatttggctaacgtgacgccgggtcctctt
ctttcgagagaaaatctgagttcagagaatgggaaatcgggtcaacatattaagaataac
gttatggtggatgatctgaagtcaaaagtgaaagctcctggaaatgatcataccaagacg
tctgattcagatgtgagaaataacaaagagaacggcgggctaaaaaagggtattcaacat
gctgatgcagtggcctttaccggcctgcccacagagtgggttcctccaaagctaacatta
ccccttctagacttggtagatgttgtctttcaactccaggagggtgggtggatcaggagg
aaagctttttgggttgccaaacagatacttcaactggggatgggcgatgcattagacgat
tgggtactagagaaaatccgtattttgcggcggggaactgtagttgcttctggaattcaa
cgggttgaacagatactatggccggatgggatattcatcacaaaacatccaaaaaggcag
caacaatccagcagttctgacgaggaacagcaacaagaagcagagagacgggccaagttc
gttcgtgaattgatgatcgaaaaagctccagcgactattgtgagccttgtgggtcaaaag
gagtatgaacaatgtgcggaagatctctactttttccttcagtcatcagtatgtctaaaa
ctgttggcatatgaccttgtggagctgttgctaacctcggcgtttccggaaatggagcag
tctttcaaacagttgcaagaagaaaaacatctctttggtcaatacacaccaccaacctga
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