Brassica napus (rape): 106346743
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Entry
106346743 CDS
T04128
Name
(RefSeq) eukaryotic initiation factor 4A-1
KO
K03257
translation initiation factor 4A
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106346743
03012 Translation factors [BR:
bna03012
]
106346743
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106346743
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106346743
mRNA cycle factors
Stress granule specific factors
106346743
Translation factors [BR:
bna03012
]
Eukaryotic type
Initiation factors
eIF-4
106346743
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106346743
Exosomal proteins of bladder cancer cells
106346743
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
106346743
NCBI-ProteinID:
XP_013641618
UniProt:
A0A078F164
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All DBs
Position
A5:complement(8860625..8862752)
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AA seq
412 aa
AA seq
DB search
MAGSAPEGTQFDTRQFDQRLNEVLEGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLVQCQALVLAPTRELA
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRSD
SIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatcagcacctgaaggcacccagttcgatactcgtcagtttgaccagaggctc
aatgaagtccttgagggacaggatgagttcttcacctcctatgatgaggtccatgagagc
tttgatgccatgggtttgcaagagaaccttcttaggggtatctatgcctatggttttgaa
aagccttctgctattcagcaaagaggaatcgttcccttctgcaagggtcttgatgtgatc
cagcaggctcagtctggtactggcaaaaccgccactttctgctctggtgtcttgcagcag
cttgacttctccctcgtccagtgccaggctctcgtcttggctcccaccagagagcttgct
cagcagatcgagaaggtcatgcgtgctctcggagactaccttggcgtcaaggtccatgct
tgtgttggtggaaccagtgtccgtgaggatcagcgcattctccaggccggtgttcacgtt
gtggttggaactcccggtcgtgtctttgacatgctccgaagacagtctcttcgctctgac
tccatcaagatgtttgtccttgacgaagctgatgagatgctctcccgtggtttcaaggat
cagatctacgacatcttccagcttctcccaccaaagattcaggtcggagtgttctcagct
acgatgccaccagaggctctcgagatcacgaggaagttcatgagcaaaccggtgagaatc
ctggtgaagcgcgacgagctcacgcttgagggtatcaagcagttctacgtgaacgtggag
aaggaagagtggaagctcgaaactctctgcgacctctacgagaccttagccatcactcag
agcgtcatcttcgtcaacactcgccgcaaggtggactggctcactgacaaaatgaggagc
cgtgaccacacggtgtcagccactcacggagacatggaccagaacacgagagacatcatc
atgagagagttcaggtctggttcctcccgtgtcctcatcacgacggatctcttggctcgt
ggtatcgatgtgcagcaagtgtctctggtcatcaactttgacctcccgactcagccggag
aattaccttcaccgtatcggaagaagtggaaggttcgggaggaaaggtgtggccattaac
tttgtgacgaaggatgatgagagaatgctttttgatattcagaaattctacaatgttgtt
gttgaggagcttccctcaaacgtcgccgacctgctttga
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