Brassica napus (rape): 106346758
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Entry
106346758 CDS
T04128
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106346758
03015 mRNA surveillance pathway
106346758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106346758
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106346758
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106346758
NCBI-ProteinID:
XP_013641636
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All DBs
Position
A6:complement(6660557..6663741)
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AA seq
395 aa
AA seq
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MAKPSRGRRSPSVSGSSSRSSSRSRSTPSRSISRSRSLSSSSSSSPSRSVSSGSRSPPPR
GKSSAGPASRRGRSPPPPQSKGASSPSRKAAPVQESLVLHVDSLSRNVNEGHLKEIFGNF
GEVVHVELAMDRAVNLPKGYAYVEFKAREGAEKAQLFMDGGQIDGNVVKAKFTLPPRQKV
SSPPKPVSREAPKSDSAGADIEKDGPRRPRETSPQRKPVLSPRRRSPLPRRGASPRRLPD
SPPRRRPSSPIRRRGDTPPRRRAASPSSPPRRRRSPPRGSPRRIRGSPVRRRSPPPLRRR
SPPRRLRSPLRRSPIRRRSRSPIRRPVRSRSRSLSPRRGRGPAGRRGRSSSYSSSPSPRR
VPRKISRSRSPRRPLRGKRSSSNSSSSSSPPPRKT
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaagtcgtggacgtcgttcaccttccgtctctgggtcttcctctcgttcc
agctccagatctcgttcgactccgtccaggtctatttcccgttccagatcgctctcttct
tcttcttcttcatctccttccaggagcgttagctctgggagtcgcagtcctcctcctcgt
ggtaaaagttctgctgggcctgctagtaggcgaggtcgctctcctcctcctcctcagtct
aaaggagcctcttcaccctctaggaaagctgcacctgttcaagaatcacttgttctccat
gttgattctctcagcaggaatgtgaatgaaggccatctcaaagaaatatttggcaacttt
ggtgaagttgttcatgtggaacttgccatggatcgagctgttaatcttccaaaaggatat
gcttatgttgagttcaaggcaagagagggtgctgagaaagctcagctgtttatggatggt
ggtcaaattgatggaaatgttgtcaaagcaaagttcacactgccaccgcgtcagaaagta
tcttcaccccctaaacctgtctcaagagaggctcctaaatctgatagtgccggtgctgac
attgagaaagatgggcccaggcgcccaagagagacttctccgcaacggaaaccagtactt
tctccaagaaggcgatcacctcttcctaggagaggcgcgtcacctagaagattacctgat
tctccccctcgtcgaaggccaagctctcctatccgccggcgtggtgatacaccacctaga
cgcagggctgcatcgccatcttctcctccaagacgacgtagatctcctccgaggggctcc
cctagaagaatccgtggcagccctgttcgtagacggtctcctcctcctctaagacgaagg
tcacctccaaggagactacgcagtcctctaagaagatctccaatccgcagacgtagccga
tccccaattcgtagacctgttcgctctcgttcaaggtcgctttcaccccgcaggggacga
ggtccagctgggagacgtgggaggtcatcttcatactctagttcgccaagtcccagaagg
gttcctaggaagatttcaaggagccgcagtcctagaaggccactgagagggaaaagaagc
agcagtaacagtagcagcagcagctcaccgcctcctcgcaaaacataa
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