Brassica napus (rape): 106346867
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Entry
106346867 CDS
T04128
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106346867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106346867
03036 Chromosome and associated proteins [BR:
bna03036
]
106346867
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106346867
Coactivators
SAGA/TFTC/STAGA complex
106346867
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106346867
STAGA complex
106346867
TFTC complex
106346867
SAGA complex
106346867
SLIK complex
106346867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
106346867
NCBI-ProteinID:
XP_048638354
LinkDB
All DBs
Position
A6:complement(6964293..6968631)
Genome browser
AA seq
651 aa
AA seq
DB search
MAEAIPSSSLSPKSLQSPNPMEPSPASSAPPPSSSQQQQQHMTPPISNSAASPAMAAVTN
TEGAIQNNISNPQPNPAAGAQIPSPSPLDQQAQTQQQQLGGQTQQIMQQISSSSIPQLSQ
QQQQQIPQQQQQQHMSPQQQIPMSNYHIAQSLQRSPSVSRLNQIQQQQQQGQYGSVLRQQ
AGMYGTMNFGGSGSVQQQNQQMGNPNLSRAGLVGQSGHLPMLNGAAGAAAQMNIQSQLLA
ASPRQKPGMVQGTQFHPGSSGQQLQGIQGMGMMNSLNLSSQMRGNPALYAQQQRINPAQM
RQQLSQQNALTSPQVQNLQRTPSSLAFMNSQLPGLAQNGQAGMMAQQQWLKQMSGITSPN
SQSFRLQQSQRQQALLLQQQMPSAQLHQNSMSLNQQQIQMLHQQQQQQQSQMGQAQMSQS
HQQQQLQQMQQPQQQMQMQQQQQMSVNQQQPSPRMTSHAAQKSVSLTGSQPDVTQSGTTT
PGGSSSQGTEATNQLLGKRKIQDLVSQVDAHAKLDPDVEDLLLEVADDFIDSVTSFACSL
AKHRKSSILEPKDILLHLEKNLNLTIPGFSSEDKHQTKNAPTDLHKKRLAMVRALMESSK
SETNASNSKETNRQMMVNPNGQNHLLRPSPSSEQLVSQTSGPHMLQHMTRY
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctattccttcatcgtctttgtcacccaagtctctccaatctcctaatcca
atggaaccttcccctgcatcctccgcacctccaccgtcctcatcgcaacaacaacaacaa
cacatgacacctccgatctctaattccgcagcttctccggcgatggcggctgtaacgaac
accgaaggtgcaatccagaacaacatcagcaatccgcaaccgaacccggccgctggagct
cagatcccgtcgccttctccgttggatcagcaggcccagactcagcaacaacaactcggt
ggtcagactcagcaaattatgcagcaaatctcctcctcctcgattccgcagctatctcag
caacagcagcagcagattcctcagcaacagcagcagcaacatatgagtcctcagcagcag
attccgatgtcgaattaccatatagctcagtctctccagcgatctccttccgtctctcgc
cttaatcaaattcagcagcagcagcagcagggtcagtacggtagcgttttgaggcagcag
gctgggatgtacgggacgatgaactttggcgggtcgggttcagttcagcagcagaatcag
cagatgggtaacccgaatttgtcgagggcgggtttggttggtcaaagtggtcacttgcct
atgcttaacggtgctgctggagcagctgctcagatgaatattcagtcccagttattggca
gcttcgccgaggcagaaacctgggatggttcaaggtacgcagtttcatccaggaagttct
ggacaacagttacaggggattcaaggaatgggaatgatgaattcacttaatttgagctcg
caaatgagaggtaatcctgctctctatgctcagcagcagcggatcaaccctgcgcagatg
aggcagcaattgtcacagcaaaacgctcttacttcccctcaggtccagaacctgcagaga
acaccttcttccctcgcattcatgaattctcagctaccgggtttggcccaaaatggacaa
gctggcatgatggcgcagcagcaatggctgaagcagatgtcgggaataaccagtcccaat
tcacaatcattccggctccaacagagtcaaagacagcaggctctactcttacagcagcaa
atgccctctgctcagttacaccaaaattccatgtccttgaatcagcagcaaatacagatg
ctacatcaacagcagcagcagcaacaatcacaaatgggccaggctcagatgagccaatcc
catcaacaacagcaactacagcagatgcagcaaccccaacagcagatgcagatgcagcag
cagcagcaaatgtcagtaaatcaacaacagccatctccaaggatgacgagtcatgcagcg
cagaaatctgttagtttaacaggttcgcaaccagatgtgacacagtccggtacaacaaca
ccaggtggtagttccagccaaggaacagaagcaacaaatcaactgcttggcaaaagaaag
atacaggatctggtttcgcaggtggatgcgcatgctaaattggatcctgatgttgaagac
ctccttctggaggtagcggatgacttcattgattcggtgacttcctttgcatgtagtttg
gctaagcatcgtaaatcatccatattggaaccgaaggatatattactccacctagagaaa
aacttgaacttgacaattcctggattctcaagtgaggataaacaccaaacaaaaaacgca
ccaacagatctccacaagaagcgacttgcaatggtgcgtgctttgatggaatcctcaaaa
tcggagacgaatgcaagcaattctaaagaaactaatagacaaatgatggttaacccaaat
ggtcaaaaccatctcttaagaccatcgccaagttcagagcaattggtttcgcagacatcc
ggtcctcacatgttacaacatatgacacgctactaa
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integrated database retrieval system
