Brassica napus (rape): 106346873
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Entry
106346873 CDS
T04128
Symbol
BNAA01G26540D
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106346873 (BNAA01G26540D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106346873 (BNAA01G26540D)
03029 Mitochondrial biogenesis [BR:
bna03029
]
106346873 (BNAA01G26540D)
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106346873 (BNAA01G26540D)
Atg1 complex
106346873 (BNAA01G26540D)
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106346873 (BNAA01G26540D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
106346873
NCBI-ProteinID:
XP_013641790
UniProt:
A0ABQ8ES70
A0A078FZV9
LinkDB
All DBs
Position
A1:24616551..24619175
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AA seq
586 aa
AA seq
DB search
MNRSSSNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGDQMICSPSPSSSSSSSS
SVRPRDKWFNLALRECPAALESFDIGRRSSLEPLVVDVVLVARQPFQMSLSDQDETKNEQ
VIERWLVQYDNRKVREAAASRSSSSNSKLQVMYKKATLLLRSLFVMVRLLPAYKIFRELN
SSGQICKFKLVPKVPTIVEPFTRREEAEMQKFAFAPVDTVCGRLCMSVLYRSLSDVSCEH
SAPVSPTFITDYVGSPLADPLKRFPSLPLSYGSPPLLAFQRRHSWSFDRFKASSPPPSVS
CSPSPTRSDSQALVRRLPDIPTGRRKDEERDFSPPCSPSGPVSRGITRTESAPVRIPAPS
FESKQNLVAPSPRLKLLRQASLKPVRNSGGAVESGAGLEKLFLYGREDFRRSSGVRLSTN
SSPRISFSRSSSRSYQEDFDDNDFPCPFDVEYDEITDPSSRPGSFDQRGDIHEPPLESSG
SYPKKSQDAAVGALVNMLKKAPPLRQDVSESSIPEIYWNNNNKKPAGAHEVAAASMTASG
IALAAKTTADALEELRSYKEMKNVLLSQSTMGSSSVTTSPFAVSGS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggagtagcagcaattcagaaggtgctaaagcagagcagatcatattcgagttc
ttcgccaaaagcctccacataatcctcgaatcaaggactcctttcatgtcttcccgaaac
ttcagcggcgaccagatgatctgctccccttccccttcctcctcctcctcatcttcctct
agcgtcaggccccgcgacaaatggttcaacctagccctcagagaatgccctgcagcctta
gagagtttcgacatcggccgcagaagcagcctcgagcctctggtcgtggatgtagttctt
gtagcgagacaaccatttcagatgagtttgtcagatcaagatgagacaaagaacgagcaa
gtgatagaacggtggttggtgcagtatgataacagaaaggttagggaagctgctgcttct
cggtcgagtagtagtaacagtaagctgcaagtgatgtataagaaagcgactttgctgctg
agatcactctttgtgatggtaaggctcttgcctgcttacaagatcttcagagaactcaac
tcctccggacagatctgcaagtttaagctcgtccctaaggtccccaccattgtcgagccg
ttcactcggagagaagaggcggagatgcagaagttcgctttcgcgccggttgacaccgtc
tgcggtaggctttgcatgtcggtgttgtatcgttctctctctgacgtcagctgtgagcac
tcggctcctgtctctccgacgtttataacggactacgttgggagtcctttggctgatccg
ttgaagaggttcccttctctgcctctctcttacggttcgcctccgttgctggcgtttcag
aggcggcatagctggagtttcgataggttcaaggcctcctctcctccgccttcggtttct
tgctcgccgtctcctacgcggtcggattcgcaggcgttggttcgtcgtcttcctgatata
cctactggtcgtaggaaggatgaagagagagacttctcccctccttgctctccttcagga
cctgtctcgagaggcatcacgcgtactgagagtgctcctgttagaatcccggctcctagt
tttgagtccaagcaaaacttggtggcgccttctcctcgtttgaaactgttgagacaggct
tctttgaagcctgtgaggaacagtggtggtgctgttgaatctggagcagggttggagaag
ctgtttctttatgggagagaagactttaggaggagctctggagtgaggctgtctaccaac
agctcaccgaggatatcgttttctcgaagttcgagtagatcataccaagaagattttgat
gataatgacttcccttgcccgtttgatgttgagtatgacgagattactgatcctagcagc
agaccagggtctttcgaccagagaggagatatacatgaaccaccacttgagtcaagcggc
tcctacccaaagaagtcacaagatgctgcagttggtgctcttgtgaatatgctgaagaaa
gctccgcctcttaggcaagacgtctctgaatcttccatacctgagatttactggaacaac
aacaacaagaaacctgcaggggctcacgaggtggcagcggcgtctatgacagcttcgggg
attgctctggcggcgaagacaacagctgatgcgttggaagagttgaggtcgtacaaggaa
atgaagaatgtgttgcttagccaatccacaatgggttcttcctctgtcactacttcaccc
tttgctgtttcaggatcttga
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