Brassica napus (rape): 106346888
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Entry
106346888 CDS
T04128
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106346888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106346888
03012 Translation factors [BR:
bna03012
]
106346888
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106346888
Translation factors [BR:
bna03012
]
Eukaryotic type
Release factors
106346888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
G-alpha
MMR_HSR1
EF-G_D2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
106346888
NCBI-ProteinID:
XP_013641805
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Position
A6:complement(7306245..7311406)
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AA seq
534 aa
AA seq
DB search
MDIEADIRALQLDSAEENNGVGGVIPADQNSDGVEIVDKMDEDLKDEVQESAPVPDVQQA
PEDHDQEMLHPVHNPAKAKEKAAQEKAAKEEAEEEAEANKKRHLNVVFIGHVDAGKSTIG
GQILFLSGQVDDRQIQKYEKEAKEKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETES
TRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLG
VSKLVVVVNKMDDPTVNWSKERYDEIEQKMVPFLKSSGYNTKKDVIFLPISGLMGINIDK
SMDRNVCPWFSGPSFFEVLNAIEVPPRDPNGPFRMPIIDKFKDMGTVVMGKVESGSIREG
DSLIVMPNKEHVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILAGFVLSSTVKPVPA
VTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELISQIDMKTRKPMKKKILFV
KNGAAVVCRIQVSNSICVEKFSDFPQLGRFTLRTEGKTIAVGKVTALSGASSSA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaggctgatatccgcgcattacagcttgattccgcagaagagaacaatgga
gttggaggtgtcattccggcagatcagaactcagatggagttgagatcgtagataaaatg
gatgaagacctgaaagatgaggttcaagaatcagcgcccgtccctgatgtgcaacaagct
cccgaggatcatgatcaggaaatgctccatccagtgcataacccagcaaaagctaaagag
aaggcagcccaggagaaggccgccaaagaggaagctgaagaagaggcagaagcaaacaaa
aagagacacttgaatgtggtgttcattggacatgttgatgctgggaagtctacaattgga
ggacaaattctcttccttagcggtcaggtggacgaccgacaaatccaaaagtatgaaaag
gaagcaaaagaaaaaagtagagaaagctggtatatggcatatataatggatacaaatgaa
gaagagagggccaagggtaaaactgttgaagttggaagggctcattttgaaactgagagc
actagatttacaattctggatgctccgggtcataagagttatgtaccaaatatgattagt
ggagcatctcaggccgacattggtgtgctggtgatatcggctcgtaaaggtgaatttgaa
acaggatatgagaggggcgggcagacgcgtgaacatgttcaactggcaaaaacattgggc
gtgtcaaagctggtggttgttgtgaacaagatggatgacccaacggttaactggtcgaaa
gagaggtacgatgaaattgaacaaaaaatggtaccatttctgaaatcctctggctacaac
acaaagaaagatgttatcttcctgcctatatctggtctgatggggattaatatagacaag
agtatggatcgaaacgtttgtccttggttcagcggccctagcttttttgaagtcctcaat
gctattgaagttccgccacgggatcctaatggtccattcaggatgcccattattgataaa
ttcaaagacatgggaactgttgttatgggaaaagtagaatcgggcagcattcgggagggt
gattccttgattgttatgccaaacaaggaacacgtgaaagtggttgctatatattgcgat
gaagacaaagttaagcgtgctggacctggtgagaatttgagagtccgtataactggcatt
gaagacgaggatatccttgcaggttttgttttatctagcacggtgaagcctgtacctgcc
gttactgagttcgttgcccaattacaaatccttgagctgcttgacaatgcgatctttaca
gctggttacaaggctattctccacattcatgcggttgttgaggaatgtgagataattgaa
ttgataagccaaattgatatgaagactaggaaacccatgaaaaagaaaattctatttgtg
aagaatggtgctgctgttgtctgccgtatacaggttagcaattcaatctgtgttgaaaaa
ttctcagattttccgcaacttggaagattcactctgcgaactgaagggaaaacaattgct
gttggaaaagtgactgcgctctcaggtgcttcctcaagcgcttga
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