Brassica napus (rape): 106347047
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Entry
106347047 CDS
T04128
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106347047
03083 Polycomb repressive complex
106347047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106347047
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106347047
Histone modification proteins
HAT complexes
HATB complex
106347047
HDAC complexes
Sin3A-HDAC complex
106347047
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106347047
PRC2.2
106347047
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106347047
Heterochromatin formation proteins
Other heterochromatin formation proteins
106347047
Chromatin remodeling factors
NuRD complex
106347047
NuRF complex
106347047
NuRF complex (fruit fly)
106347047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SCAP
MIOS_WD40
Beta-prop_WDR35_TULP_N
eIF2A
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Cytochrom_D1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_Vps41
DUF6922
Motif
Other DBs
NCBI-GeneID:
106347047
NCBI-ProteinID:
XP_013641988
UniProt:
A0A078GNM0
LinkDB
All DBs
Position
C9:complement(8263659..8265774)
Genome browser
AA seq
414 aa
AA seq
DB search
MADEGSKEDAGMDQVEEDFSIWKKNTPFLYDLMISNPLEWPSLTVHWVPSPPSPYAADPY
FGVHKLILGTHTSGDAQDFLMVADAVIPTPDAEPGLGGTNQDPIVPKVEIRQKIRVDGEV
NRARCMPQKPTLVGAKTSGCEVFLFDYAKHASKPQTSDCDPDLRLLGHDMEGYGLSWSPF
KEGYLLSGSQDKKICLWDVSATPQDKVLNAMFVYEGHECAVEDVAWHMKNENLFGSAGDD
GRLVIWDTRTNQMQHQVKVHEKEVNYLSFNPFNEWVLATASSDSTVALFDLRKLNVPLHV
LSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH
GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEDENEIDEDIKQS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaaggtagtaaggaggatgctggaatggatcaggtagaggaggatttctct
atatggaagaagaacacaccattcctctacgatcttatgatctctaaccctctcgagtgg
ccctctctcaccgtccactgggtcccatctcccccttccccttacgcggcggatccttac
ttcggcgtccacaagctcatcctcggaacccacacttccggcgatgctcaagatttcctc
atggtcgccgacgccgtcatcccaactcccgacgccgagccagggttaggcggaacaaat
caagatcccatagtccctaaggtggagattaggcagaagatacgtgtcgatggagaagtg
aacagagcgcgttgcatgcctcaaaagcccactcttgtcggtgcgaagacgagtgggtgt
gaggtgtttttgtttgattacgccaagcacgcttcgaagcctcagactagtgattgtgat
cctgatctgaggctactgggacacgacatggaagggtatggattgtcttggagccccttc
aaggaaggttatcttctgagtggttcgcaggataagaagatatgcctttgggatgtttca
gctacaccgcaagataaggttctgaatgcaatgtttgtgtacgaggggcatgaatgcgct
gtggaagatgtagcgtggcacatgaagaacgagaacctttttggttctgctggtgatgat
ggtcgattggtgatatgggacacgcggacaaaccaaatgcaacaccaagtgaaagttcac
gagaaagaggtgaactatttgtctttcaatccgttcaatgaatgggttttagcaacagct
tcgtcagactcaactgttgccttgtttgacctccggaagctgaatgtgccattgcacgtc
ttgagcagccacgagggagaggttttccaagtggagtgggatcctaaccatgaaacagtg
cttgcatcttccggtgaagacagaaggctgatggtctgggacctgaacagggttggagaa
gagcagcttgagatagagttggatgcagaagatggtccaccagagttgctcttttctcac
ggtggccacaaggctaagatatcagattttgcttggaacaaaaacgagccttgggtcatt
gcaagtgtagcagaagacaacagtcttcaggtctggcaaatggcggagagcatctatcga
gatgaagatgaaaatgagatcgatgaggacatcaaacagtcatga
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