Brassica napus (rape): 106347097
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Entry
106347097 CDS
T04128
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106347097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106347097
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
106347097
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
106347097
NCBI-ProteinID:
XP_013642043
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Position
C1:13736272..13739183
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AA seq
200 aa
AA seq
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MAMSQIVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN
HPHILLLQIGNTFCKLPGGRVKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW
RPNFETMMYPYCPPHITKPKECKRLYVVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFHFNMISS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtctcagattgtgaacacgtacccgctttcgaactacagcttcggaacaaaa
gaaccgaagctcgaaaaagacacctccgtcgcggatcgactcgctcgtatgaaaataaac
tatatgaaagagggcatgaggactagcgttgacgccattctgctggtacaagaacacaac
catcctcacatacttctcctgcaaattggtaacaccttctgcaaacttccaggtggacgc
gtgaagcctggagagaatgaagttgaaggcctgaagagaaagttgaccagtaagcttgga
ggcaattccgctggtcttgtacctgactggaaggtaggagaatgtgttgcgacatggtgg
cgtccaaacttcgaaaccatgatgtacccttactgccctcctcacatcacgaaaccaaag
gaatgtaagagactctatgtggttcacttgtctgagaaagagtactttgcagtgcccaaa
aacttgaagctcttggccgtccctttgtttgaactctatgacaacgttcagagatatgga
ccagttatatcgaccattccgcaacagctatccagattccatttcaacatgattagttcg
tga
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