Brassica napus (rape): 106347444
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Entry
106347444 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106347444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106347444
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106347444
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Motif
Pfam:
Ion_trans
DUF6525
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
106347444
NCBI-ProteinID:
XP_013642436
UniProt:
A0A078I7I2
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Position
A1:25112746..25116417
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AA seq
760 aa
AA seq
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MASPKEKDDVPMLPISDTSRTRPFTSRSRSVSLSNTCSTIDGFDSSTVVLGYTGPLRAQR
RPPLVQMSGPLSSTRTPEPLFLLPPPSDSVGISSSQPERYPSFATLEHKKSDDEFVLKHA
NLLRSGQLGMCNDPYCTTCPSYYNRKAAQIPSSRVSAFFDSKFHNALYDDAKGWARRFAT
TANRYLPGIMNPHSKFVQSWTKFFALSCLLAIFIDPLFFFLILVKQNDKCIVIDWPMAKA
FVAVRSVTDILFSVNILLQFRLAYVAPESTVVGAGQLVAHPRKIARHYFRGKFLLDLFIV
MPLPQILILWIIPAHLGASGANYAKNLLRAAVLFQYIPKLYRLLPLLAGQTPTGFIFESA
WANFVINLLTFMLAGHVVGSCWYLFGLQRVNQCLRDACGNSDHECRNLIDCGRGESSEAF
AAWKGNASASACFQEGGFPYGIYMKAVNLTNHTSLFTRYSYSLFWGFQQISTLAGNQVPS
YFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGRRNLEMTLRRRDVEQWMSHRRLPEG
IRKRVREAERFNWAATRGVNEELLFENMPDDLQRDIRRHLFIFLKKVRIFSLMDESILDA
IRERLKQRTYISSSTVLHRGGLVEKMVFIVRGEMESIGEDGSVLPLSEGDVCGEELLTWC
LERSSVNPDGTRIRIPSKGLLSYRNVKCVTNVEAFSLSVADLEDVTSLFSRFLRNPRVQG
AIRYESPYWRLRAARQIQVAWRYRRRRLQRLYTAQSSYSL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccccaaggagaaggatgatgttcccatgcttccaatctcggacacatctcgt
actaggcctttcacttccaggtctcgtagcgtatccctctcaaacacttgttccaccatt
gatggattcgacagctccacagtggttttaggctacacgggtcctcttcgagcccagaga
cgacctcctttagttcaaatgagtggtcctctttcctctactcgcactcctgagcctctc
tttcttcttccccctccttctgattcagttggtatctcctcgtcacagcctgagaggtat
ccttcttttgctactctggaacataaaaagtcagacgacgagttcgtcttaaaacacgca
aatctcttgagatctggacagttaggtatgtgtaatgatccttactgtaccacttgtcct
tcttattacaaccgcaaagctgcccaaatccccagttccagagtttctgccttctttgac
tccaagttccataatgctctgtatgatgatgctaaaggctgggctaggcggtttgctaca
actgctaatagatacttaccaggaatcatgaatcctcactctaaattcgttcagagctgg
actaagttctttgccctctcatgcttgttggctattttcatagatcctctcttcttcttt
ctcatattagtcaaacagaacgacaaatgcattgtgattgattggccgatggctaaagca
tttgtagctgttagaagtgtaacagatattttattctctgtaaacattctgcttcagttc
cgattggcctatgtagctcccgagtctacagttgttggtgctggccagttagttgctcat
ccaaggaaaattgctcggcattacttccgaggaaagtttttactagacttgttcatagta
atgccacttccacagatattgatattatggataataccagcacacttaggtgcatctggg
gcaaattatgcaaagaacctgctacgtgctgcagttcttttccagtacattccgaagttg
tatagactactaccacttcttgctggccaaacacctacaggcttcatatttgagtctgct
tgggctaattttgttattaatcttctcacctttatgcttgctggtcatgttgttggctct
tgctggtatctttttggtctgcagagagttaaccaatgcctacgagatgcttgcggtaac
tctgatcatgaatgtagaaatcttatagattgtggtcgtggagagagctctgaagcgttt
gctgcatggaaaggtaatgcaagtgcaagtgcttgttttcaagagggtggttttccttat
ggaatctatatgaaggcagtcaatctcaccaatcatactagcctcttcacaagatatagt
tactctcttttctggggttttcagcaaatcagcacgcttgctggaaaccaagtcccaagt
tactttcttggggaggtcttctttaccatggggattatcggtctggggctattgcttttt
gcgcttcttattggtaatatgcagaacttccttcaagctcttggtcgaaggaatcttgaa
atgacgctgagacggcgtgatgtggagcaatggatgagccatagaaggttgccagaaggt
ataagaaagagggtgcgagaggctgagcggttcaactgggctgctactagaggagttaac
gaagaattgctatttgagaatatgcctgatgaccttcaaagagatataagacgacacctc
ttcatttttctcaagaaggtgaggatattttctttgatggatgaatcaatcttagatgcc
atccgtgagaggctgaaacagaggacatacataagtagtagcacggtcttgcaccgtgga
ggtctagttgagaaaatggtatttatagtgagaggtgagatggagagcattggtgaagac
ggttctgttcttcctttatcagaaggagacgtttgtggtgaggagctcctcacttggtgc
cttgaacgatcttctgttaatcctgatgggacgaggataagaattccatcaaagggattg
ctaagctacagaaatgttaagtgtgtgacaaacgtggaggcgttttccctgagtgtagca
gatcttgaagacgtaacaagcttgttctcgagattcttaaggaatcctagagtgcaagga
gccattaggtatgaatctccatattggaggctacgagcagctaggcagattcaagtggca
tggagataccgaaggagacggcttcagagattgtacactgctcagtctagttacagcctt
tag
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