Brassica napus (rape): 106347458
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Entry
106347458 CDS
T04128
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 19
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106347458
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106347458
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106347458
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
106347458
NCBI-ProteinID:
XP_048594515
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Position
A1:complement(25118267..25122058)
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AA seq
743 aa
AA seq
DB search
MTSPNENDQVSIPEATSRAHTRAFNFKNRSVSLSNSTYYIDGCDNSKVALGYTVPIRTQR
RPPGPLYSTPRPESHFPPSIEPPDSSSTVDVRSEDESVLENANILKSGQLGMCNEPYCTT
CPSYYSHQSANFHTSKVSDSRFHTVLYDDARGWAKRFASSVRRCVPGIMNPHSKFVQVWT
RFLAFSCLMAIFIDPTFVFLLLIRHDNKCIEIDWPKTTVLVSLRSMFDLIFFINILLQFR
MAYVAPESRIVGAGQLVDHPRKIARNYLRGKFFLDLFIVLPIPQIMTLSILPAHLGTSTA
GFERNIIRSTFIVQYIPKLYRLLPLLAGQTPTGFIFESAWASFVINLLTFMLAGHAVGSC
WYFSGIERVKKCLLYAAWNNSVDERRNLIDCARGNIYASASLRARWRDSDSVNACFQESG
FSYGIYAKAVNLTSHSSIFTRFSYSLFWGFQQISTLAGNLSPSYSVGEVFFTMGITGLGL
LLFARLIGNMHNFLQALDRRRMEMMLRRRDVEQWMSHRLLPEDIRKRVREAERFNWAATR
GVNEEFLFENMPEDLLRDIKRHLFKFLKKVRIFSLMDESILDSIRERLKQRTYISSSTVL
HRRGLVEKMVFIVRGEMESIGQDGSVLLLSEGDVCGEELLTWCLERSSVNPDGRSIKLPL
KGLVSNRSVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVLGAIRYESPYWRLRAATQI
QVAWRYRRRRLHRLYTAQSTSRR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccaaacgaaaacgaccaagtttccattccagaagcaacatctcgtgctcac
accagggctttcaatttcaagaaccggagtgtttccctctcaaattcaacttattacatt
gatggatgtgacaactcaaaggtggctttgggctacacagtcccaattcgaacacagaga
agaccacctggtcctctttactctactcccagacctgagtctcactttcctccttctatt
gaacctcctgattcctcctctaccgttgatgttcgatctgaagacgaatccgtattggaa
aatgcaaatatcttgaaatctggacaactagggatgtgtaatgaaccttactgtaccact
tgtccttcttactacagccaccaatctgctaattttcatacttccaaagtttctgactct
aggttccacactgttctgtatgatgatgctagaggttgggctaagcgatttgcttcctct
gttcgtagatgcgtgcctggaatcatgaatcctcattccaaattcgttcaagtctggact
agattcttagccttttcatgcttgatggctatttttatagatcccaccttcgtcttcctc
ttattaatccgacatgacaacaaatgtatagagattgattggcctaagactaccgtactg
gtgtctcttagaagtatgtttgatcttatattcttcattaacattctgcttcagtttcga
atggcctatgtagctcctgagtctagaatagttggtgctggccagttagttgatcatcca
agaaaaattgctcgcaattacttgcgaggcaaattttttcttgacttgttcatagtgtta
cccattccacagataatgacattatcgatattaccagcacacttaggcacatccacagca
ggatttgagagaaacattatacgcagcacatttatagtacaatacattccaaagttatat
aggcttcttcctcttcttgctggccaaacaccgacaggcttcatatttgagtcggcttgg
gcaagctttgttattaatcttctaaccttcatgcttgctggtcatgctgttggatcttgc
tggtatttttcaggaattgagagagtaaaaaagtgtctgttgtatgcggcttggaataac
tcggtggatgaacgtaggaaccttatagattgtgctcgtgggaacatctacgcatctgcg
tcactacgagctcgctggagagatagtgacagtgtcaatgcttgttttcaagagagtggc
ttttcgtatggcatatatgcgaaggcagtcaatcttactagtcattctagtatcttcaca
cgattcagttactcactgttttggggattccagcaaataagcacgcttgctggaaaccta
tcaccaagttactcagtgggggaggttttctttacaatgggcatcactggactaggcctt
ttgctttttgcgaggctcattggtaatatgcacaacttccttcaagctcttgatcgaagg
aggatggaaatgatgctgagacggcgtgacgtggagcagtggatgagccatagactgttg
ccagaagatataagaaagagggtgcgagaggcagaaaggttcaactgggcagcgactaga
ggagttaacgaggagtttctctttgagaatatgcctgaagatctcctgagagatataaaa
cgtcatctcttcaaatttctcaagaaggtgagaatattctcgctgatggatgaatcaatc
ttggattcaatacgtgagaggctgaaacagagaacgtacataagtagtagcacggtgttg
caccgcagaggtctagttgagaaaatggtattcatagtgagaggtgagatggagagcatt
ggacaagacggttctgttcttcttttatcagaaggtgatgtttgtggtgaagagcttctc
acttggtgcctcgaacgctcttctgtaaaccctgatgggaggagcataaagttgccgcta
aaggggttggttagcaacagaagtgttagatgcgtgacaaacgtagaggcgttttcgctg
agtgtagcagatcttgaagacgtaacgagcttgttctcaagattcctacggagccatcga
gtgctaggggccataagatacgagtctccgtattggaggctaagagcagctacgcaaata
caagtggcttggagatacagaaggagacgacttcacagattatacactgctcagtcaact
tcccgccgatag
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