Brassica napus (rape): 106347535
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Entry
106347535 CDS
T04128
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106347535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106347535
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106347535
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
U-box type E3
106347535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
HEAT_2
KAP
zf-Nse
zf-RING_UBOX
MCAfunc
zf-C3HC4_4
RPW8
zf-C3HC4_2
MLKL_N
zf-C3HC4
zf-NOSIP
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106347535
NCBI-ProteinID:
XP_013642555
UniProt:
A0A816IJB6
LinkDB
All DBs
Position
C3:complement(52965038..52967713)
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AA seq
656 aa
AA seq
DB search
MEEEKGAVAQSLIDVVTEIASVSDYRITVKKLCSNLARRLKLLVPMFEEIRESNDPISED
TLGTLVSLKEALSSAKDHLKFCSGGSKIYLVMEREQVTSKLLEVSVQLEQSLSKIPYEDL
DISDEVKEQVELVLSQFRRAKGRVDASDDELYQDLHSLCIKSSDVDDHQPALQRVANKLQ
LMEIPDLAQESVALHEMVALSGGENNEEMAMVLKLIKDFVQMETDNSEDQKVGVSNGQTS
TAASQKIPPVIPDDFRCPISLEMMRDPVIVSTGQTYERTCIEKWIEAGHSTCPKTQQALT
STTLTPNYVLRSLIAQWCEANDIEPPKPPSSFRPRKVSSFSSPAEANKIEDLMWRLAYGN
PEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSICE
NNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLL
NEGTHRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTETGSGMVDEALAILAILA
SHPEGKSIIGSLDAVPSLVEFIRSGSPRNRENAAAVLVHLSSTDPQHLVEAQKLGLMGPL
IDLAGNGTDRGKRKAAQLLERISRLAEQQKETAAHEQTKEEAEPTDSASTTEAADT
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaaaggtgccgttgcgcagagcttaatcgatgtagtgaccgagattgcg
tctgtttccgattaccgtataacggtgaagaagctatgcagcaatctagcgaggaggttg
aagctgcttgtcccgatgttcgaggagattagagaaagcaacgatcccatcagtgaagat
acgttggggacgctggtctccttgaaagaagccttgagctcagccaaggatcatctcaaa
ttctgcagcggagggagcaagatctatctggtcatggagagagaacaagtgacgagtaag
ctgctggaggtttccgttcagctagaacaatctttaagtaagattccttatgaggatctt
gacatatctgatgaagttaaagaacaggttgagctggttctcagtcagtttcggcgagcc
aaaggaagagtagatgcatcagacgatgagctatatcaagatcttcactcattgtgtatc
aaaagcagtgatgtggatgatcaccagcctgccctgcagcgggttgcaaacaagctacag
ctgatggagattcctgacctagctcaagaatcagtggctctgcacgaaatggttgcgttg
agcggtggtgaaaacaatgaggagatggcaatggtgctgaagctgattaaggattttgtg
cagatggagactgacaacagcgaggaccagaaagtaggggttagcaatggacaaacttcc
acggctgcgagtcagaagataccccccgtgattcccgatgattttcgctgcccaatatct
ctggaaatgatgagagatccagttattgtttcaacagggcagacctacgaacgcacctgc
attgagaagtggatagaagctgggcactcgacatgtccaaaaacacagcaggcgctaaca
agcacaacgctcacacctaactatgttctccgtagtctcatagctcagtggtgcgaggct
aatgacattgagcctccaaaacctcctagcagttttaggcccaggaaagtatcgtccttt
tcgtccccggcagaggcaaacaagatcgaagatcttatgtggagactcgcttacggaaac
ccagaggaccaaagatctgcagctggcgagatccgcctccttgcaaaacgaaatgcagac
aaccgtgtggccatagccgaagctggagccatacctcttctcgtcggcctcctcgcaact
cctgattctcgtatccaagaacattctgtcacagctcttctgaacctctccatatgtgag
aacaacaaaggagccattgtttctgctggagctatccctggtatagttcaagttctcaag
aaaggaagcatggaggctagagagaatgcggctgctacgctttttagtctctcggtgatt
gacgaaaacaaagtcactatcggtgccttgggagcaatcccaccgctcgttgtgctgctt
aacgaaggcacacatagaggcaagaaagatgctgctactgcacttttcaacctctgcatt
taccaaggaaacaaaggaaaggccatacgagcaggagtgattcccaccttgactagactc
ttaacagagaccggaagcggaatggtcgatgaggcgctggcgattctggccattctcgct
agccatcccgaagggaaatcgatcataggatcactggacgcagtcccgagcctggtggag
tttatcagatcgggttcccctagaaacagagagaacgcagctgcggttctagttcatctc
agctctactgatccacaacatctggtggaagctcagaaactcggccttatgggtccattg
atagatttagccggaaacgggacagatagagggaaaagaaaagcagcccagttgcttgaa
cgtataagccgtctagctgaacagcagaaggagacagctgctcatgaacaaaccaaagaa
gaagctgaaccaacagattcagcatccaccacagaagctgctgacacttga
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