Brassica napus (rape): 106347605
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Entry
106347605 CDS
T04128
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106347605
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
106347605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
106347605
NCBI-ProteinID:
XP_013642634
UniProt:
A0A078GFL5
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Position
C3:complement(54372483..54375330)
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AA seq
789 aa
AA seq
DB search
MDAIKPLPQVSSFSASVFSFLDDRFRDAADLSQSPALVSELETEIFELDQRLAGLNRQLE
SGLASYASFSDRIGGLLIGVNAKLADLSSSRSASDGGKGEEETREHVAGEELPSLAKEVA
QVESVRAYAETALKLDTLVGDIEDAVMSSLNKNLPTSRSSGFEEVRLHAIKTLQKTEEIL
SLVAKRHPRWGRLVSAVDHRVDRALAMLRPQAIADYRALLTSLGWPPQLSNLTSSSLDSK
SDDIQNPLFNMEGNLKSQYCGNFHALCSLQGLQLQRKSRQLGSHKGENVLFHQPLWAIEE
LVNPLTVASQRHFAKWSEKPEFIFALVYKITRDYVDSMDELLQPLVDKAKLAGYSCREEW
VSAMVSSLSLYLVKEIFPTYVGQLNEPDLSSEAKVSWLHLIDLMISFDKRAQSLVSQSGI
LSLQEDGNLLRISSLSVFCDRPDWLDIWAEIELDERLVKLKAEMDNDRNWTVKVQDELIS
TSNVYRPPIVSSILLQHLSSIIERSKSVPAIYLRASFLRLAASSTIQKFLDCLLLRCQEA
EGLTALTENNDLIKVSNSINAGHYIESVLDEWCEDVFFLEMGSGQDNPQEAPGQENFTEP
SEGIFGEEFEKLEKFRLEWINKLSVVVFRGLDARTREYIKNRKQWQEKRDKEWTVSRALV
GALDYLQGKTSIIQENLNKADFTAMWRSLASEIDKLFFNSILMANVKFSDDGVERFREDM
EVLYGVFRGWCVRPEGFFPKLSEGLTLLKMKEKQVKEGLSRGEKWLRENGVRYMTEAEAK
RIAKSRVFS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgatcaagccacttcctcaggtctcgagcttctccgcttcagtctttagcttc
ctcgatgacaggttcagagacgccgcggatctctcccaatcacccgctctggtctcggaa
ttggaaaccgagattttcgaattggatcagagattagccgggctgaaccgccagctcgag
tccggtttagcttcttacgcttcgttctccgatcgcatcggcggtctactcatcggagtc
aatgccaaattagctgatctctcttcgtctcgctccgcgtcagatggcggaaagggggag
gaggagacgagggagcatgtagctggggaggagcttccatcactggctaaagaagtagca
caagttgagtctgtgcgggcttatgctgagactgcactaaagctagatactttagttggt
gatatagaggatgctgtcatgtcttctttgaataaaaacttgccaacatctcggtccagt
ggttttgaagaagtgcgtctacacgctatcaaaacacttcaaaagacagaagagatactg
agtttagttgcaaagaggcatcctcgctggggacgtcttgtttctgcagttgatcataga
gtggatagagctttagcgatgctgagacctcaagcgatcgctgattacagagcgttgctt
acttctcttggatggccacctcagctttctaacttaacttcatcgagccttgattctaag
tctgatgatatccaaaatccgcttttcaacatggaagggaacctcaaaagtcagtactgt
ggaaacttccatgctctgtgtagcttgcagggtctgcagctgcaaagaaagtcgcggcag
cttgggagccataagggtgaaaatgttcttttccaccagccactctgggctattgaagag
ctcgttaaccctctgactgttgcatctcagcgacattttgcaaaatggagcgagaagcct
gaattcatttttgcacttgtgtataaaatcacaagggattatgtggactccatggatgag
ttactacaaccgcttgttgataaagcaaagctagctgggtacagttgcagagaagagtgg
gtttcggctatggtgagctcattgtctttgtacttggtgaaagagatattccctacatat
gttggtcagctaaacgaacctgatcttagttctgaggctaaggtttcgtggctccatctc
attgacctgatgatctcttttgataagcgagctcagtctctggtatctcagtcaggaata
ctttcgcttcaagaagatgggaatcttctgagaatctcctctctttcagttttctgtgac
agacctgattggctcgatatatgggcagagatagagctagatgagaggctcgtcaagtta
aaggcagagatggataatgatagaaactggacggtgaaggtgcaagacgaactcatctcc
acttcaaacgtttacagaccaccaattgtttccagcatccttctgcagcacttgtcatca
atcatagaacgatctaaatcagtgcctgccatttacttgagggcaagcttcctgagactg
gcagcctcgtcaacaatccagaagttcttggattgcctccttctcaggtgccaagaggct
gaaggactaactgctttaaccgaaaataacgatctaatcaaggtctcaaactctatcaat
gctggtcactatattgaatcagtcttggatgagtggtgtgaggatgtctttttcctcgaa
atgggaagtggacaggacaatccacaggaagctccgggacaggagaactttacagaacct
tctgaaggtattttcggagaagagtttgagaagctggagaagttcaggctagagtggatt
aacaagttgtctgtggtggtcttcagaggccttgatgctcggactcgagagtacattaaa
aacagaaagcaatggcaggagaagagagacaaagagtggacggtgtcgagggcactagtc
ggggctctagactacttacaaggcaaaacgtcgataatacaagaaaatctaaacaaagca
gactttacagctatgtggaggagtctagcctcagagatagacaagctgttcttcaacagc
atcttgatggcgaatgtgaagttttctgatgatggagtcgaaaggtttagagaggacatg
gaggttctatatggggttttcagggggtggtgtgttagaccggaagggttcttccctaaa
ctaagcgaggggctaacacttctgaagatgaaagagaagcaagtaaaggagggtctgagc
agaggcgagaagtggttacgtgagaatggagttcgatatatgactgaagccgaagccaag
aggatagctaagagtagagtgttctcttaa
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