Brassica napus (rape): 106347668
Help
Entry
106347668 CDS
T04128
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP71
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106347668
03110 Chaperones and folding catalysts [BR:
bna03110
]
106347668
Enzymes [BR:
bna01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
106347668
Spliceosome [BR:
bna03041
]
Complex C
Other components
PPlases
106347668
Chaperones and folding catalysts [BR:
bna03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
106347668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WD40
WD40_Prp19
WDR55
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_IFT140_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
106347668
NCBI-ProteinID:
XP_013642710
LinkDB
All DBs
Position
A6:12638041..12641569
Genome browser
AA seq
622 aa
AA seq
DB search
MEEEPKNGSAKELAVVEEEEPMVGPGPAPRVKRKRPLQFEQAYLDSLPCANMYEKSYMHR
DVVTHVAVSAADFFITGSIDGHLKFWKKKGVGIEFAKHFRSHLGPIEGLAVSVDGLLCCT
ISNDDHAVKIYDVVNYDMMAMIRLPYIPGAVEWVYTHADVKAKLAVSDRNSSFVHIYDPR
SGSNEPIASKQIHSYPIKVMKYNPVSDTVISGDTKGIIEYWSPATLQFPEDEVDFKLKSD
TNLFEIIKCKTTISAIEVSPDGRQFSVTSPDRRIRVFWFKTGKLRRVYDESLEVAQDLQR
SDAPLYRLEAIDFGRRMAVEKELEKTESAPQPNAVFDESSNFLIFATLLGIKIVNLQTNT
VARILGKVESNERYLRVALYQGDQGGKKVRKIPAAAANVNESKEPLTDPTILCCAFKKHR
IYMFSRREPEEPEDASQGRDVFNEKPSADELMSVSDIGNSSTTSLPENVIMHTTMGDMHI
KLYPEECPKTVENFTTHCRNGYYDNHLFHRVIKGFMVQTGDPLGDGTGGQSIWGREFEDE
FHKSLRHDRPFTVSMANAGQNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIEKV
KTDKNDRPYQDVKILNVTVPKS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaacctaagaatggaagcgcgaaagaattagcggtggtggaggaggaagag
ccgatggtggggccaggacctgctccacgcgtcaagcgcaagcgtccgcttcagttcgaa
caagcgtatctcgattcgcttccttgtgctaatatgtatgagaaaagttacatgcatagg
gatgtagttacacatgttgctgtctccgctgctgatttctttattactggaagcatcgat
ggccacttgaagttttggaagaaaaagggtgttggcatcgagttcgctaagcatttccgc
tcccatctaggtcctattgaaggtctagcggttagcgttgatggtttgctttgctgtacc
atctcaaatgacgatcatgctgttaagatttatgatgttgtcaactacgacatgatggcc
atgatccgcttgccctatatccccggtgctgttgagtgggtctacacacatgcggatgtc
aaagccaaacttgctgttagtgaccgaaactcttcctttgtgcacatttatgatccccgc
tctggttccaatgaacccattgcttctaaacagatacattcgtatcctattaaggtcatg
aagtacaatcctgtttctgacacagtgatatctggtgacacaaaaggaatcattgagtac
tggagtccagctacgctacagtttcctgaggatgaggtagacttcaaactaaagagtgac
acaaatctatttgagattataaagtgtaaaactacaatctctgccattgaggtgagtccg
gacggtagacagttttccgttacatctcctgatcgtaggattcgcgtattttggtttaaa
actggtaaactaaggcgggtatatgacgagtctcttgaggtggcccaagatctacagagg
agcgatgctccattgtacaggcttgaagcaattgactttggtagaagaatggctgttgag
aaggaacttgaaaaaaccgagagcgctcctcagcccaatgcagttttcgatgaaagctcc
aatttccttatatttgccactcttcttggaatcaaaatagtaaatttacaaaccaataca
gttgcaaggatccttggaaaggtggagagcaatgaaaggtatctgagagttgcactatat
caaggtgatcaaggcgggaagaaagttagaaagattccagcagccgcagcaaatgtaaat
gaaagcaaggagcctttaactgatccaactatcttatgttgcgccttcaagaaacacagg
atttatatgttcagtcggagagagccagaagaacctgaagatgcaagccaaggaagggat
gtgttcaacgagaagccttctgctgatgaacttatgtctgtctcagatattggaaactca
tccacaacgtctctcccagagaacgtgatcatgcatactactatgggggatatgcacata
aagctttacccagaagaatgtcccaaaacagtggagaacttcacaacacactgtagaaat
ggctattacgacaaccaccttttccaccgagttatcaaaggattcatggtacaaactgga
gatcctcttggggatggcactggaggacagtcaatttggggaagagaatttgaggacgag
tttcacaaaagtcttcggcatgacaggccgttcacagtgtccatggctaacgctggtcaa
aacacaaacgggtcgcagttctttattacaacagtagctacaccgtggctagacaataag
catacagtttttggcagagttgtgaagggaatggatgtcgtacagggtatagagaaagtg
aagacagataaaaacgacaggccttaccaagatgttaagatacttaatgtcactgttcct
aaatcttag
DBGET
integrated database retrieval system
