Brassica napus (rape): 106347778
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Entry
106347778 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 26
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106347778
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106347778
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106347778
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106347778
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106347778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
106347778
NCBI-ProteinID:
XP_013642828
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All DBs
Position
A6:complement(17346142..17351819)
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AA seq
1054 aa
AA seq
DB search
MRPNTRNKNKRQRPSETVDSSSQILRKMYEANDVTEEDLNHLFMIHKKPLCQGCRVNTRD
NPNCFCALVPPPNGTRKSGLWQKTSELIQALGPDLSSHRRASLSSPAGLTNLGATCYANS
ILQCLYMNSAFRDGVFSLEAELLQQYPVLDQIARLFAQLRASNRSFVDSDAFVKTLELDN
EIQQDTHEFLTLLLSLLERCLTHSAVSKAQTIVQHLFRGRLSHVTSCSKCGRDSEASSKV
EDFYALELNVKGLKSLDDSLSDYLSLEHLNGDNQYFCASCHARVDATRCIKLRTLPPVIT
FQLKRCVFLPKTTAKKKITSSFSFPQVLDMRSRLAESSESELTYELSAVLIHKGSAVNSG
HYVAHIKDEKTGLWWKFDDEEVSELGTHPFNEASSSTPKSETNVASNSGKNTTESEVFSS
SDAYMLIYSLRSSKLESWEGQREDSIDITKGDVDGVQQPEGGYLPPHLDEWISDLNATFL
EGCKQFDIRKERELNTLTERRQEVRTILSEAAVQSLEDQYFWISTDWLRLWADTISPPAL
DNTPLLCSHGKVLASKITCMKRISELAWTKLESKFNGGPKLGKGDYCRECLMDSARMVVS
SDSYKDRRTFMKSIASDVLSGKFEDGEYYVSKAWLQQWVKRKNLDAPSEADAGPTNAITC
SHGGLMPEQAPGAKRILVPENFWSFLVEDALKVTPEDTPDCPCFPLDSSQCSHCTSELSE
VADVEDALRTIKAKQRQNHEKLATGKGIALAPQSRYFLVPSPWLVQWRSYINMTGKNSSS
VPKPELLNGVIDTLKCEKHKRLLERLPELVCKRGSFFQKNPSTDKLTIIPEDDWKCFCEE
WGGIMENGVSAFTETGNNRHGSASQDVIDLEKDMDIDSQQLILRTSPEVCEECIGDRESY
ELMQKLSYSEGEVSVSLVRGKEAPKSMLEASDSGLEVDRRTSKRSRRTNYGKQTSLKVSA
TTTVYNLKMMIWQLLGVMKENQELHKGTQVIDQESATLADMNIFPGDKLWVRDTEIHQHR
DIADEICDKKMGHQDIEAGFRGTLLTGDITSEAR
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgagacctaacactcgaaacaagaacaaaaggcaaagaccttccgaaactgttgattcc
tcttctcaaattctcagaaaaatgtacgaagctaatgatgtaacagaggaagacctaaac
catctcttcatgatacacaagaagccactctgtcaaggctgccgcgtcaacacccgcgac
aaccccaactgcttctgcgccctcgttccacctcctaacggaacccgcaagtctggtctc
tggcagaagacttccgagctcatccaagctcttggtcctgatctctcctcccaccgtcgt
gcctctctctcttcccccgctggtttgaccaacttgggagctacttgctatgctaacagc
atcctccagtgcctctacatgaactctgcttttcgggatggtgttttctctcttgaagct
gagctcttgcagcagtatcctgtcttggatcagattgcgaggctctttgcgcagctgcgt
gctagcaacaggtcttttgttgactctgatgcttttgtcaagacgctcgagttggataat
gagattcagcaggatacgcatgagttcttgactttgcttttgtccttgcttgagcgttgc
ttaacccattctgctgtttccaaggcccaaaccattgtgcaacatctcttccgcggtcgt
ctctctcatgtcacctcgtgctcaaagtgtgggagggattcagaagcttcctcaaaggtg
gaggatttctatgcccttgagctgaatgtcaagggtcttaaaagtttggatgatagtttg
agtgattacctcagcttggagcatctcaatggggacaatcagtatttttgtgcgagctgc
catgctagagttgacgccacacgctgcattaagctgcgcacactacctcctgttatcact
tttcagctcaagcgatgtgttttcctcccaaagactactgctaagaagaaaattacatcc
tcgttttcctttcctcaagtgctggatatgagatcgagattggcagagtcttctgagagt
gagttgacatacgaactctctgctgtcttaatccacaaaggaagcgctgtgaacagtgga
cattacgttgctcacatcaaagatgaaaagactggcttgtggtggaaatttgacgatgag
gaagtgtcagaactgggtacacatccattcaatgaagcctcttcttcaactccaaagtcc
gagactaatgttgcctctaatagtgggaaaaacaccacagagtcagaggttttctcatcc
agtgatgcttatatgctgatttatagtcttcggtccagtaaactagaaagttgggaagga
caaagagaggattctattgacataactaaaggagatgttgatggtgttcaacagcctgaa
ggtggttatcttccgccacatctcgatgaatggatcagtgacctgaacgcaacattcctt
gagggttgcaagcaatttgatataagaaaggaaagagaattgaatactttgactgaaagg
aggcaagaagtaagaacaatactttcagaagctgctgttcagtcacttgaagatcagtac
ttttggatctccacagattggcttcgtctatgggctgataccatctcaccaccagctttg
gacaacacccctttactgtgttcccacgggaaagttcttgcctcaaaaattacttgcatg
aagcgtatatctgaacttgcatggaccaagttagaatcaaagttcaatggtggaccaaag
ttagggaaaggggactactgcagggaatgccttatggatagtgctcgcatggttgtctct
tctgacagctataaggatcgaagaacattcatgaaaagcatagcaagcgatgttctttcg
ggaaagtttgaggacggagagtattacgtctctaaagcatggttgcagcaatgggtaaaa
aggaaaaaccttgatgctcccagtgaagcagatgcaggcccaacaaatgcaatcacgtgc
agtcatggggggctgatgcctgagcaagcgccaggggccaaaaggattctagttccagag
aacttctggtcattccttgttgaagatgctttaaaagtgacgccagaagatactccggac
tgtccttgtttccctctggactccagccaatgttctcactgcacatcggaactctctgag
gttgctgacgtcgaggatgcactaagaacaataaaggccaagcagcgccaaaaccacgag
aagttagccacgggaaagggtatagcattagcgccacaaagccgatatttcttggtacct
tctccgtggttagtgcagtggagaagctatattaacatgactggaaaaaacagttcctca
gtaccaaaacctgaacttcttaatggagtcattgatactctcaagtgcgagaagcacaaa
cgactcctagaaaggctccctgaacttgtctgcaaacgtggctcattttttcagaaaaat
ccatctacggacaagctgacaatcatccctgaggatgattggaaatgtttctgtgaggag
tggggaggtatcatggagaatggagtctctgcttttactgagactggtaataacaggcac
ggaagtgcatctcaggacgttattgaccttgagaaggatatggacattgatagtcagcag
cttattcttaggacatccccggaggtttgtgaggaatgcataggagacagagagagctat
gagttgatgcagaagctcagttactctgaaggagaagtatctgtcagcttggtgcgcgga
aaggaagctccaaagtcaatgttagaggcatctgactccggcttggaggtggaccggcgt
acctcaaagcggtcacggagaacaaactatgggaagcagaccagcttaaaagtttctgca
acaacgactgtgtacaacttaaagatgatgatatggcaattacttggggtgatgaaagag
aaccaagaacttcacaaaggcacacaagtgattgatcaggaatctgcaactcttgcagac
atgaatatattccctggcgacaagctttgggtgagagataccgagatacaccaacaccgc
gacattgctgatgagatatgcgataagaagatggggcatcaagatatcgaagcagggttt
cgcgggacgcttttgacgggagatatcacttctgaagcccgttag
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integrated database retrieval system
