Brassica napus (rape): 106347948
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Entry
106347948 CDS
T04128
Name
(RefSeq) protein CHROMATIN REMODELING 24
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106347948
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
106347948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
GCOM2
Motif
Other DBs
NCBI-GeneID:
106347948
NCBI-ProteinID:
XP_013643031
LinkDB
All DBs
Position
A6:complement(18953233..18959992)
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AA seq
1074 aa
AA seq
DB search
MADNTTSTRRKPQSLNDRHYRLLQDLSAPPKHAPSSSSTHEETKIKLAGRRRLCKASVKE
DVSEEDDDPDLADFDSPGKVDTPLERAGTGNKFTPWDEESKEAKTEVGDLPSFSMITDFG
SPSPHLEPKEERHGGGGQNEIMDILDDLTSKLGTMSIKKKKDIQSSDSESVKPSFSLISD
LSESSSKAGADSLSDRQGNVGFSIREEKASNVFAGERGERVSNVGKHQPFSGQQHYVAKS
EGYRPDYNLDRGKGKLEEVDRSLKTTRHVEVSEKLRSVGRSNAARLRDLDDDDDDDCVVL
TGKKAAEMKIHLEKPTKPARSHNTATHAYEEKVSEDEGSITFTGPKSSYTLRGKIATILY
PHQREGLKWLWSLHIQEKGGILGDDMGLGKTMQICSFLSGLFHSKLIKRAMIVAPKTLLP
HWMKELATVGLSQMTREYYGNSVKAREYDLNHILQGKGVLLTTYDIVRNNTKALQGYQLY
TDDDDEDDIKWDYMILDEGHLIKNPSTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALF
NFSCPGLLGDKKWFKDNYEHYILRGNDKDASDRDKRIGSTVAKKLREHIQPFFLRRLKSE
VFGDDATTSRLSKKDEIVVWLRLTACQRQIYEAFLNSEIVLSAFDGSPLAALTILKKICD
HPLLLTKRAAEDVLEGMESTLTQEEAGVAERLAMHIADNVDTDDFQTKNDSISCKLTFIM
SLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKGLDRLKTVEEFQSGH
VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTS
ATVEEKIYRKQVYKGGLFKTATEQKEQIRYFSQQDLRELFSLPKGGFDVSPTQQQLYEEH
YNQIKLDETLESHVKFLETLGIAGVSHHSLLFSKTAPIQPIQQDEVEEIRRITTSFVGGP
SAKSSQENMINGAVYAFKPKDVNLDKRINISPIDESEWSESEIKARISRLSMLFQNKSMV
ASLPDRGAKIQKQIAELTRELEEIKAVKSNDMPHQVIDLEDISQKMHKGLNLLE
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacacgaccagcactagaagaaagcctcagagcttgaacgatcgtcactat
cgtctcctccaggatctctccgcgcctcctaaacacgctccttcttcttcttccacccat
gaagaaacgaagataaagctcgcgggacggcgtcgtttatgcaaggcctcggtgaaggaa
gatgtttcggaagaagacgacgatcctgatttggctgatttcgattccccaggtaaagta
gatacaccactggagagagctggaactgggaacaagttcacaccttgggatgaggaatcg
aaggaagctaagacagaggtgggtgacttgcccagcttttcgatgatcacagactttggt
tctccctcacctcatcttgagccaaaggaggaaaggcatggtggtggaggacagaatgag
attatggatattttggatgatttgacctctaagcttgggacaatgtctattaagaagaaa
aaagatatccaaagcagtgattctgagagtgttaaaccctcattttccttgatatcggat
ctatctgagtcatcaagtaaagctggtgctgatagtctcagtgacaggcaagggaatgtt
ggtttttcaatccgggaagagaaagctagtaatgtgtttgcaggagaaaggggggaaaga
gtttcaaacgttggaaagcatcaacctttttctggtcagcagcactatgttgctaagtct
gaagggtatagaccggactacaatcttgaccgtgggaagggaaaactcgaagaagtcgac
cgaagtctgaagacgactagacatgtagaggtcagtgagaagctaagatcagtgggaagg
tcgaatgctgctaggctaagagacttagacgacgatgatgatgatgattgtgttgtgttg
actggtaaaaaggcggctgaaatgaaaatccatcttgaaaagcctacaaagccagctcgg
agtcacaacactgcaacacatgcttatgaagagaaagtgtcggaggatgaagggtccatc
actttcactggcccgaaatcttcttacacactgcgtgggaagattgcaacaattttatat
ccacatcagagggaagggctgaagtggctctggtcattgcacatccaagagaaaggtgga
atacttggagatgatatgggtttgggtaaaactatgcagatatgtagctttctttccggt
ttgttccactcgaagttgatcaaacgtgctatgatagtggcaccaaaaaccctgctgcct
cactggatgaaagaattagctaccgtgggactttcacaaatgactagggaatactacggc
aattctgtaaaagcccgagagtatgatctcaaccacattctacagggtaaaggtgttctt
cttacgacttatgatatcgtgcggaacaatacaaaggctttgcaaggttatcaactctat
actgatgatgatgacgaagatgacatcaaatgggactacatgattctggacgagggacat
cttattaaaaatcccagcacacaaagggccaagagtttgcttgagattccaagttcccac
cgtataattataagtggtacaccaatccagaataatttaaaggaattgtgggctttgttc
aatttcagctgccccgggctccttggtgacaagaaatggtttaaggacaattatgagcat
tacattcttcgtggaaatgacaaagatgcctctgatagagacaagcgaataggctcaaca
gtagcaaagaaattgagggagcatattcaacctttcttcttgcggcgccttaagagtgaa
gtctttggtgatgatgccacaacctccagactttcaaagaaggatgaaattgttgtatgg
ctacggttaacagcttgccagaggcaaatatatgaggctttcttaaacagtgaaattgtt
ctgtcagcttttgatggttcgccattagcagctcttacgattttgaagaaaatatgtgat
catccgcttctcttgactaagagggctgctgaggacgtcctcgaaggaatggaatcaaca
ttaacacaggaagaagcaggcgtggcagagagattggctatgcatattgcagacaatgtg
gatacagatgattttcagaccaagaatgacagtatctcttgcaaattgacatttatcatg
tcactactggaaaatttgattccagaagggcaccgtgttctaatcttctcccagacacgc
aagatgctaaatctcattcaggattctcttacttccaacggttatagtttcttgcggatt
gatggtacaacaaaaggccttgacagattgaagactgttgaagaatttcaaagtggtcat
gtggcgcctatatttcttctcacatctcaagtaggtggtctcggccttactttgacaaag
gcagaccgcgtgattgtggttgacccggcttggaatccaagtactgacaaccagagcgtt
gatcgagcatacagaattgggcaaacgaaggatgtcattgtgtataggttaatgacctca
gcaactgtcgaagaaaagatttaccgaaagcaggtttacaagggaggcttgtttaaaacc
gcgactgagcaaaaagaacaaatccgctatttcagccaacaggaccttcgagaacttttc
agtcttcctaagggaggatttgatgtttcacctacacaacagcaactatacgaagagcat
tacaaccagatcaaactagatgaaactctggaatcacatgttaagttcctggaaactctg
ggtatagctggagtgagtcatcacagcttactcttctccaagactgctcctattcaacct
atacaacaggacgaagtagaagaaataaggagaataacaacatcattcgtgggaggtcca
tcagcaaaatcttcacaggaaaacatgatcaatggggctgtgtatgctttcaaaccaaag
gacgtgaatttggacaagagaatcaacatttctccaatcgatgagagtgaatggtcggaa
agcgagattaaagcaagaatcagtagactatctatgctattccagaacaagagtatggtc
gcaagtttacctgacagaggagcgaaaatacagaaacagattgctgaattgactcgagag
ctagaagaaataaaggcagtaaaaagcaacgatatgcctcatcaagttattgacttggag
gatataagccagaagatgcacaaaggattgaatctgttggagtaa
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