Brassica napus (rape): 106348005
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Entry
106348005 CDS
T04128
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03410
Base excision repair
bna03420
Nucleotide excision repair
bna03430
Mismatch repair
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106348005
03410 Base excision repair
106348005
03420 Nucleotide excision repair
106348005
03430 Mismatch repair
106348005
03440 Homologous recombination
106348005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106348005
03400 DNA repair and recombination proteins [BR:
bna03400
]
106348005
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106348005
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
106348005
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
106348005
MMR (mismatch excision repair)
DNA polymerase delta complex
106348005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
106348005
NCBI-ProteinID:
XP_048606655
LinkDB
All DBs
Position
C3:complement(39691922..39699165)
Genome browser
AA seq
1090 aa
AA seq
DB search
MNRGGKSKKRPPPSTTLPPGKHRATGTPSPSPVVGTLEDEFVDEDVFVDEIDEESLILRD
MEEREALSARSSTWARPPLSPAYLANSQSIIFQQLEIDYVIKEIHKELLPGSSGQAAVIR
IFGVTREGHSVCCFVHGFEPYFYIACPPGMGPDDISRFHQSLEGRMRESNKNANVPKFVR
HIEMVQKKSIMYYQQQKSQTFLKITVALPTMVASCRGILDRGIQIDGLGMKSFQTYESNI
VFALRFMVDRDIVGGNWIEVPAGKYKKDARTLSYCQLEFHCLYSDLISHAPEGEYSKMAP
FRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGEDQPFIRNVMTLNSCAPIVGVDVM
SFETERKVLLAWKDFVRDVDPDIIIGYNICKFDLPYLIERAAALGIEEFPLLGRVKNSRV
RMRDSTFSSRQQGTRESKETTIEGRFQFDLFQAIHRDHKLSSYSLNSVSAHFLSEQKEDV
HHSIITDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMCIYNYVEMARVTGVPISFLLAR
GQSIKVLSQLLRKAKQKNMVLPNAKQSGSEQGTFEGATVLEARTGFYEKPIATLDFASLY
PSIMMAYNLCYCTLVTPEDVRKLNLPPEHINKTPSGETFVKQSLQKGILPEILEELITAR
KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQM
IEQTKKFVEDKFTTLGGYEYNAEVIYGDTDSVMVQFGVPDVEAAMTLGKEAAEYISGTFI
KPIKLEFEKVYFPYLLINKKRYAGLVWTNPQKFDKMDTKGIETVRRDNCLLVKNLVTESL
NKILIDRDVQGAAEYVKNTIADLLMNRIDLSLLVITKGLTKTGDDYEVKSAHGELAERMR
KRDAATAPNVGDRVPYVIITAAKGAKGYEKSEDPIYVLENNIPIDPKYYLENQISKPLLR
IFDPVLKNASSELLHGDHMRSISITTPSNSGIMRFAKKQLSCVGCKVPISTGTLCARCKG
REAELYCKNVSQVSDLEELFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRMKAQKDMAT
AKQQLDRWSF
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagggggaaagtccaaaaagcgaccgcctccgtcgactaccttacccccgggg
aaacaccgggccacgggtactccgtcaccgtccccagtcgtcggaaccctagaagacgaa
ttcgtggacgaggatgtgttcgtggacgaaatcgacgaagaatccctaatccttcgcgat
atggaagagcgtgaagccctatccgcacgctcatccacttgggctcggcctcctctctca
cccgcgtatctcgcgaactcgcagagtatcatttttcagcaattggagattgattatgta
atcaaggagattcacaaggagcttttacctggttcctctgggcaagctgcagtcatcagg
atcttcggggtaaccagagaaggtcatagtgtgtgttgctttgttcatgggtttgaacct
tacttttacattgcttgccctcctggaatgggcccagacgatatctctcgtttccatcag
agtcttgagggaaggatgagggaatccaataagaatgccaacgttccgaagttcgtccgt
catatagaaatggtgcaaaagaaaagcattatgtattaccaacagcaaaagtcccaaact
tttctcaagattactgttgcgttaccgactatggtggctagctgtcgcggcatccttgat
agaggcatacagattgatggactgggtatgaagagcttccaaacatatgagagcaatatt
gtttttgctctccgtttcatggttgaccgcgatatcgtgggaggaaactggatcgaagtg
cctgctgggaaatataagaaggatgcaaggactttgtcatactgccaattggagtttcat
tgcctgtactcagatttgatcagtcatgctccagaaggtgaatactcaaaaatggcccca
ttccgtgtgttaagtttcgatattgagtgtgctggtcgtaaaggacactttccagaggct
aagcatgatcctgtgatccagatagccaatcttgtaactcttcagggagaggatcaacca
tttatacgcaatgtcatgactcttaactcatgtgctccaatcgtaggcgtagatgttatg
tcttttgaaacagaaagaaaggtcttactagcttggaaggattttgttcgtgatgttgat
cctgatattatcattggctataacatctgcaaattcgatttaccttatctgattgagaga
gctgcagcactgggaatcgaggaatttcctcttcttggtcgtgtaaagaacagtagggtc
cggatgagggactcaacgttttcatcaagacaacaaggaacaagggaaagtaaagagacc
acaattgaaggacgatttcagtttgacctttttcaggctatacacagagaccacaaatta
agttcctattcgctgaattctgtctcagctcactttctatccgagcagaaagaggatgtc
caccattctataataaccgatcttcagaatgggaatgcggaaaccaggagacgtcttgct
gtttattgtttgaaggatgcatacctccctcagcggcttctcgacaaactgatgtgtata
tataattatgtcgaaatggctcgtgtgactggtgttcctatttcttttcttcttgctaga
ggacagagtatcaaggttctatctcagcttcttaggaaagctaaacagaagaacatggtt
cttccgaatgctaaacagtcagggtctgaacaaggaacttttgaaggcgcaactgttcta
gaagcaagaacaggtttctatgaaaagccaattgcaactctggattttgcttcattgtac
ccgtcaattatgatggcatataatttgtgctactgcaccttggtgacacctgaagatgtg
cgcaaactgaatcttccacctgagcatatcaataaaactccatcaggggaaacatttgtt
aagcaaagtttacaaaagggtatacttccagagattcttgaagagctcattactgcccgt
aaaagagctaaagcagatttaaaggaggctaaggatccgcttgagaaggctgttttagat
ggtagacaattggcattaaagatcagtgcaaattctgtctacgggtttacaggagccact
gttgggcagttaccttgcttagaaatatcatcaagcgtgactagctatggtcgtcagatg
attgaacaaacaaagaaattcgtggaagataaattcacaacattgggagggtatgaatac
aatgcagaggtcatttatggggacacggattcagtcatggtgcaatttggcgtaccggat
gtagaagctgcgatgaccttggggaaggaagctgcagaatatattagtggaacttttatc
aaacctatcaaattggagtttgaaaaggtttattttccatatttgctgatcaacaagaag
aggtatgctggtttggtgtggactaatcctcaaaagtttgacaaaatggacaccaaggga
atcgagacagtacgaagggataattgtttactggttaagaaccttgtcactgagagtctt
aacaaaatactaatcgatagagatgttcaaggcgcagctgagtatgttaaaaatacaatt
gcggatcttctcatgaaccgtatcgacttatcacttttggtgattactaagggtctaact
aaaacaggagatgattatgaagttaaatcagctcatggtgagcttgctgaacgcatgcgt
aagagggatgctgctacagcgccaaatgttggcgaccgggtaccatatgttattattaca
gcagccaaaggtgccaagggttatgaaaagtcagaagatccgatctacgtacttgagaat
aacatccctatagacccaaagtactacctagagaatcagattagcaagccgcttcttagg
atttttgacccggtcttaaaaaacgctagcagtgaacttctccatggagatcacatgagg
tcaatatcaattactactccttcgaacagtggcataatgagatttgccaagaaacaactg
agctgtgttggctgcaaagtgccgatcagcactggaacattgtgtgcacgttgcaaggga
agagaagccgagttatactgcaaaaacgtatcacaggtgtcggacctagaagagctcttt
ggaaggctgtggacacagtgtcaggaatgccaaggctctcttcaccaagatgtcttgtgc
accagtcgagattgtccaatattttaccggagaatgaaagcacaaaaagacatggccaca
gccaagcaacaactcgaccgttggagcttctaa
DBGET
integrated database retrieval system
