Brassica napus (rape): 106348102
Help
Entry
106348102 CDS
T04128
Name
(RefSeq) probable sphingolipid transporter spinster homolog 1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106348102
Transporters [BR:
bna02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
106348102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_4
MFS_3
Motif
Other DBs
NCBI-GeneID:
106348102
NCBI-ProteinID:
XP_048606573
LinkDB
All DBs
Position
C3:37829362..37832145
Genome browser
AA seq
495 aa
AA seq
DB search
MTKYGEQRDSPAVTAAASSSTATKRFWTPGRFVAILCIVNLINYVDRGVIASNGVNGSSR
TCDAKGLCSAGTGIQGEFKLSNFQDGLLSSAFMVGLLVASPIFAALSKRFTPFKLIGVGL
TVWTLAAVGCGFSYNFWMIAVFRMFVGVGEASFISLAAPYIDDSAPAARKNLWLGLFYMC
IPAGVALGYVFGGYVGNHLGWRWAFYIEAIAMAFFVVLSFCIKPPQLKGFAAKESKKPST
SIETVALTHAEASQIKTVSPKSQNLVVVFGKDMKALFSEKVFIVNVLGYITYNFVIGAYS
YWGPKAGFGIYQMKNADMIFGGLTIICGIIGTLGGSYVLDRINATLPNTFKLLAASTLFG
AAFCFAAFCMKNMYAFIGLFAVGEILIFAPQAPVNFVCLHCVRPNLRPLSMASSTVLIHI
LGDVPSSPLYGKMQDRLKNWRTSTLIITSILFLAAIIWGIGIFMNSVDRSNEKSDDEVEE
EEKLETKADNNSVPV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatatggtgagcagagagattctccggctgtaacagcagcagcatcttcttcg
accgctacaaaacgattttggactccgggaagattcgttgcgatcttgtgtatcgtgaac
ctgatcaattacgtggatcgaggagtgattgcgagtaatggtgttaacggaagctcgagg
acttgtgatgccaagggcctttgctctgctggcactggcattcaaggagagtttaagtta
agcaactttcaagatggtcttttgtcctctgcgtttatggttggtcttcttgttgcttct
ccaatcttcgctgcactctccaaaaggttcactccttttaaactaattggagtgggacta
actgtttggactctcgctgctgttggttgcggcttctcttacaacttctggatgattgct
gtttttcgaatgtttgttggggttggtgaggcttccttcattagtcttgcagcaccttac
atcgatgatagcgctcctgctgcaaggaaaaatttatggcttggactgttctacatgtgt
ataccagcaggagttgctctaggctacgtgtttggtggatatgttggaaaccatcttgga
tggcgttgggcgttttacattgaggcaatcgcaatggctttctttgttgttttgtccttc
tgtatcaaacctccacagctcaaaggttttgctgctaaagaatctaagaaaccctctaca
tctattgaaacggtcgctcttacacatgctgaagcttctcaaatcaaaaccgtatccccc
aagagccagaacctggtagtagtatttggaaaagacatgaaggctctattcagcgagaaa
gtgtttatagtgaacgttcttggctacatcacctacaactttgtgatcggagcttactca
tattggggaccaaaagctggttttggtatctaccaaatgaaaaacgcagacatgattttt
ggaggccttaccatcatctgtggtatcattggtacgttaggcggaagctatgtccttgat
cgcatcaacgctacactcccaaacaccttcaagttactagcggcatcaactctattcggg
gcagcgttttgtttcgctgctttctgcatgaagaatatgtatgccttcatcggtctattc
gcagtgggagaaattttaatctttgccccacaggctccggttaactttgtgtgtctacat
tgcgttagaccaaacttgagaccactatcaatggcttcctcaactgttttgatccatatc
ttaggcgatgttccttcttcccctctatatggaaaaatgcaggaccgtctcaaaaactgg
aggacttcaactcttataattacttcaatcctcttcctcgcagctattatatggggcatt
gggatatttatgaatagtgtggaccggtctaatgaaaagagtgacgatgaggtcgaggag
gaagagaaattggaaaccaaagcagacaacaactctgttcccgtctaa
DBGET
integrated database retrieval system
