Brassica napus (rape): 106348188
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Entry
106348188 CDS
T04128
Name
(RefSeq) probable sphingolipid transporter spinster homolog 1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106348188
Transporters [BR:
bna02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
106348188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_4
MFS_3
PTR2
Motif
Other DBs
NCBI-GeneID:
106348188
NCBI-ProteinID:
XP_013643325
UniProt:
A0A078F6N9
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Position
A6:complement(20008636..20011500)
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AA seq
499 aa
AA seq
DB search
MTKHGDQRDSPAVTAAAEASSSTATKRFWTPGRFVAILCIVNLINYVDRGVIASNGVNGS
SRTCDAKGLCSAGTGIQGEFRLSNFQDGLLSSAFMVGLLVASPIFAALSKRFTPFKLIGV
GLTVWTLAAVGCGFSYNFWMIAVFRMFVGVGEASFISLAAPYIDDSAPAARKNLWLGLFY
MCIPAGVALGYVFGGYVGNHLGWRWAFYIEAIAMAFFVVLSFCIKPPQLKGFAAKESKKP
STSIETVALTHAEASQIKNVTPKPKTQNLVVLFGKDMKALFSEKVFIVNVLGYITYNFVI
GAYSYWGPKAGFGIYHMKNADMIFGGLTIICGIIGTLGGSYVLDRINATLQNTFKLLAAS
TLFGAAFCFAAFCMKNMYAFIGLFAVGEILIFAPQAPVNFVCLHCVRPNLRPLSMASSTV
LIHILGDVPSSPLYGKMQDRLKNWRTSTLIITSILFLAAIIWGIGIFMNSVDRSNEKSDD
EVEEEEKLETKADNNSVPV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacatggtgaccagagagattctccggctgtaacagcagcagcagaagcatct
tcttcgaccgctacaaaacgattttggactcctggaagattcgttgcgatcttgtgtatc
gtgaacctgatcaattacgtggatcgaggagtgattgcgagtaatggtgttaacggaagc
tcgaggacttgtgatgccaagggcctttgctctgctggcactggcattcaaggagagttt
aggttaagcaacttccaagatggtcttttgtcctctgcgtttatggttggtcttcttgtc
gcttctcctatcttcgctgcactctccaaaaggttcactccttttaaactaattggagtg
ggacttactgtttggactctcgctgctgttggttgcggcttctcttacaacttctggatg
attgctgttttccgaatgtttgttggggttggtgaagcttccttcattagtcttgcagca
ccttacatcgatgatagcgctcctgctgcaaggaaaaatctgtggcttggactgttctac
atgtgtataccagcaggagttgctttaggctacgtgtttggtggatatgttggaaaccat
ctcggatggcgttgggcgttttacattgaggcaatcgcaatggctttctttgttgttttg
tccttctgtatcaaacctccacagctcaaaggttttgctgctaaagaatcgaagaaaccc
tctacatctattgaaacggtcgctcttacacatgcagaagcttcccaaatcaaaaacgtt
acccccaaaccaaagacacaaaacctggtagtcttgtttggaaaagacatgaaggctcta
ttcagcgagaaagtatttatagtgaacgttcttggctacatcacctacaactttgtgata
ggagcttactcatattggggaccaaaagctggttttggtatctaccacatgaaaaacgca
gacatgattttcggaggccttactatcatctgtgggatcattggaacgttaggcgggagc
tatgtgcttgatcgcatcaacgctacacttcaaaacaccttcaagttactagcggcatca
actctattcggggcagcgttttgtttcgctgctttctgcatgaagaatatgtatgccttc
atcggtctattcgcggtgggagagatcttaatctttgctccacaggctccggttaacttt
gtgtgtctacattgcgttagaccaaacttgagaccactatcgatggcttcttcaactgtt
ttgatccatatcttaggcgatgttccttcttcccctctatatggaaaaatgcaggaccgt
ctcaaaaactggaggacttcaactcttataataacgtcaatcctcttcctcgcagctatt
atatggggcattgggatatttatgaatagtgtggaccggtctaatgaaaagagtgacgat
gaggtcgaggaggaagagaaattggaaaccaaagcagacaacaactctgttcccgtctaa
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