Brassica napus (rape): 106348281
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Entry
106348281 CDS
T04128
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106348281
Transcription machinery [BR:
bna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
106348281
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
106348281
NCBI-ProteinID:
XP_013643447
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Position
A6:complement(21434543..21437469)
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AA seq
510 aa
AA seq
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MGVVFISSSAARSPLGLSTDLRTQRSSLKKPSIVAFKADDSTPTNSSLIIDKQKEKRAVA
TRRKPCKDTKTTKSLDQNVAPSCPLDYNEAAARLESIYKLSPPPGTSLEEEDGIDGSSKV
RVPRRRKRKESGEEKKVVVRNNVKKEKRLTLDKRIALKRNVQEKPVNASSSAREKVTKKQ
QEEEKIERLVRDYSASNDIVSLDWKKMKIPPVVSSAEHTWLFKLMQPMKALLQVKDELQK
SMGREPREAEIAGEINMSVAEVKRKIEIGRAARNKLIKTNLRLVLFVMNKYFQDLTNGPK
FQDLCQAGMRGLITAIDRFEPKRKLRLSTYGLFWIRHAVIRSMTTSNFTRVPFGLESVRV
EIYKTKMELLFEFGRLPTEEEVVKRLKISPERYREVLRAAKPVYSLNSKHAVTQEEFIKG
ITDVDGVGADNRRQLALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNI
SREMVRKHEVKALMKLKHQARVDYLRQYII
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgtgtttatttcaagttcagctgcaagatcacctctcgggctaagcactgat
cttcggacacaacggtcttcactgaaaaagccatccatcgtcgctttcaaagcagatgat
tccactcccaccaactcatctctgatcattgacaagcaaaaggagaagagagcagtagca
acgagaagaaagccctgtaaagacacgaaaacaacaaaatctctagatcaaaacgtggct
ccttcctgtcccttagattacaacgaagccgctgcaagactagaaagcatttacaagctt
agccctcctcctggaacttccctcgaggaagaagacggtatcgatggcagctccaaagtg
agagttccacggaggaggaagaggaaagagagtggagaagagaagaaagtagttgtgagg
aacaatgtgaagaaggagaagcgactgactcttgataaacggatcgcgttgaagagaaac
gttcaagagaaaccggtcaacgcttcttcttctgctagggagaaagtaacgaagaagcag
caagaggaggagaagatcgagaggctagtgagagactactcagcttctaatgatatagtc
agcttggactggaagaaaatgaagatacctcctgttgtttcttccgctgaacatacttgg
ttgtttaagttgatgcaacctatgaaggcactccttcaagtgaaagatgaattgcaaaaa
agcatgggaagagagccaagggaagctgaaatagctggagagatcaatatgagcgtggct
gaagtgaaaaggaaaatcgaaatcggtagggctgcaaggaacaaacttattaagaccaat
cttcgccttgtattgtttgttatgaacaaatattttcaagatttaaccaacggaccgaag
ttccaagacctgtgtcaagccggtatgagagggctcatcacagctattgaccggtttgag
cctaaaaggaagttacgtctctcaacttatggtttgttttggatcagacatgccgtcata
cggtctatgacaacctctaacttcactcgtgtcccttttggacttgaatcggttagagtg
gagatctacaaaacaaagatggagctcttgtttgagtttggaagactccctacagaggaa
gaggtagttaagagactcaagatctcacctgagagataccgtgaagtcttgagagccgcg
aaaccggtttactcgctaaactcaaaacatgcggttactcaagaagagttcatcaaaggg
atcacggatgttgatggtgtaggagctgataaccggagacaacttgctctgctcaggcta
gctctcgacgacgtgctggattcactgaagcctaaagagagtcttgttattagacaaaga
tacggtctggacgggaaaggagacaggacgctaggagagatagctgggaatctcaacatc
tccagagaaatggtgaggaaacatgaggtcaaggctttgatgaagctcaagcatcaggct
cgagttgattaccttcgtcagtacatcatctga
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