Brassica napus (rape): 106348348
Help
Entry
106348348 CDS
T04128
Name
(RefSeq) ubiquitin domain-containing protein DSK2b
KO
K04523
ubiquilin
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106348348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106348348
03051 Proteasome [BR:
bna03051
]
106348348
Membrane trafficking [BR:
bna04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
106348348
Proteasome [BR:
bna03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106348348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Mod_r
Dsc3_N
CUE
Ubiquitin_5
TBK1_ULD
Rad60-SLD_2
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
106348348
NCBI-ProteinID:
XP_013643522
UniProt:
A0A816SHS6
LinkDB
All DBs
Position
A6:20914120..20917294
Genome browser
AA seq
542 aa
AA seq
DB search
MGGEGDSSKPQTAGEGGDVVAVNVRCSNGSKFSVSTSLDSTVEAFKALVAQNSEVPANQQ
RLIYKGRILKDDQTLLSYGLQADHTVHMVRGSAPASSPPPSAPATTQATAPGVTRGVGSN
DSSIPGLGFNPLGGGNAMSGLFGAGLPDLEQAQQQLAQNPNMIRDMMNQPAIQSLMNNPE
FMRSMIMSNPQMRELVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIE
SMPEGFNHLRRMYENVQEPLMNATTMPGNGGNNAASNPFAALLGNQGVTTDAASNNSTTP
NAETGTGNGIPNANPLPNPWGATAGQTNAPGSTNSGGDARSTGLGGLGGLGGLGMLGADS
PLGVTPDASQLSQILQNPAMSQMMQSVLSNPQYMNQLMNLNPQLRTMLDSNPQLREMMQN
PDFLRQFSSPEMMQQMMTLQQSLFSQNRNTTTQDPGQTGAAAAGAGNNAGLDLLMNMFGS
LGAGGLGSTNQPNVPPEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLGSI
GQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagaaggagattcgagtaagccgcagactgctggtgaaggaggagatgttgtt
gccgtgaacgtcaggtgctcgaacggatccaaatttagcgtgagcacgagtctcgattcc
acggtggaggccttcaaagcgttggtggcgcagaacagcgaagtgccagcgaatcagcag
cgtctgatttacaagggtcgcatcctcaaagacgatcagacgctcctcagctatggtttg
caggctgatcacaccgttcatatggttcgaggctcggcgcctgcatcatcaccaccacct
tctgctccagctacaacccaagccactgcccctggtgtcactcgaggtgttggttcaaac
gacagctcaattcccgggcttggattcaatcctttaggtggtgggaacgctatgtctgga
ctattcggagctggtcttcctgatcttgagcaggcacagcaacagctagctcagaaccct
aacatgattagagatatgatgaaccaaccagccattcagagtctaatgaacaaccctgag
tttatgaggagtatgatcatgagcaaccctcagatgcgtgagcttgtggatcgcaaccct
gagcttggccatgtcctcaatgacccgagcatccttaggcagactttggaagcggcgagg
aacccggagctgatgcgtgagatgatgaggaataccgatagggctatgagtaatattgag
tctatgcctgaggggtttaaccatcttaggcgtatgtatgagaatgtccaggaaccgctc
atgaatgctacgactatgcctgggaacggtggaaacaatgcggcttctaatccttttgct
gctctccttggaaaccagggtgttactaccgatgctgcttctaataattctacgacaccg
aatgctgagacggggacaggaaatggtattccgaatgcaaatccacttcctaatccttgg
ggtgctacagctggccagacgaatgcccctggaagtacaaattctggtggggatgcgaga
agcactggtcttggtggtcttggagggcttggtggactgggtatgcttggagcggattca
cctcttggtgtcactccagatgcttctcagttgagccagatattgcaaaatccagccatg
tcccagatgatgcaaagcgtcctttccaatccacaatacatgaaccagctgatgaatctc
aacccacaactgcgaaccatgctagattcgaatcctcagttgagggaaatgatgcagaac
ccagatttccttcgtcagtttagctccccggagatgatgcagcaaatgatgactctacag
caatcattgttctctcagaataggaatacgaccacccaggatccggggcaaactggtgct
gctgcagcaggggcaggcaataacgcagggctggatttattgatgaatatgtttggcagt
cttggtgctggtggcctgggtagcacgaaccaacctaatgttcctcctgaagaacgcttt
gcgactcagttgcaacagctgcaagaaatgggattctatgacagagcagagaacataagg
gctttgcttgcaaccaatggaaacgttaacgctgctgtagaacgactcttggggagtatt
ggccagtag
DBGET
integrated database retrieval system
