Brassica napus (rape): 106348406
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Entry
106348406 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106348406
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106348406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106348406
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106348406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
106348406
NCBI-ProteinID:
XP_013643597
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All DBs
Position
A4:complement(16166630..16168357)
Genome browser
AA seq
351 aa
AA seq
DB search
MREKGGRRENPKTLDPVGEDGAVTGKDGKGFFACYILTSLSPRHKGHTYIGFTVNPRRRI
RQHNGEITSGAYRTKKKRPWEMVLCIYGFPTKVSALQFEWAWQHPRESLAVREAAAAFKS
ISGLASNIKLAYTMLSLPAWNSLNLTVNYFSSKYAHHGGLSPSLPPHMEVRVCPMDDLPC
FTKEDNNSQQEDEDSPDSNEEEDDDDSGNQSQPGNPTSSYLLDRHCEKPKGPGTVLDDRL
ANFTGFGLLDESDEDEVSIDAMEKEPETVFNDRLANFTGFGLGKIAEDKVSHCSTMEKDC
WRRSNFVTSTTEVEVIDLMTPSPTCRVGSSMKRPRVSEFIDLTRSPNFIEL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaaagggggaagaagggaaaatccgaaaaccctagatcccgtcggcgaggat
ggtgccgtcaccggaaaagatggaaaagggttcttcgcgtgctacatactgacctccctc
agccctcgtcacaagggtcacacttatatcgggttcacggtgaacccaaggcgcaggata
aggcagcacaatggagagatcacaagtggtgcatatagaacaaagaagaaacgtccttgg
gaaatggtcctctgtatctatggtttccccactaaagtctctgcccttcagtttgagtgg
gcttggcagcatccaagggaatcacttgcagtgagagaagctgctgctgctttcaaatcc
atctctggacttgctagcaatatcaagcttgcttacactatgctatctcttcctgcttgg
aacagtttaaacctgactgtcaactatttctcatcaaagtatgctcaccatggcggtctt
tctccaagtttgcctccgcacatggaggtccgtgtttgtcctatggatgatcttccctgt
ttcactaaagaagacaacaattctcaacaagaagatgaagatagtcctgatagtaatgaa
gaagaggatgatgatgatagtggcaaccaaagccagcctgggaatccaacttcaagctac
ttgcttgaccgacattgtgagaaaccaaaaggacctggaactgtacttgatgacagatta
gcaaacttcactggctttgggttattagatgagagtgatgaagatgaagtatccattgac
gctatggagaaagaaccggagactgtttttaatgacaggctagcaaacttcactggtttt
ggcttaggaaagatagctgaagataaagtatcacattgtagtactatggagaaagactgt
tggagaagaagcaactttgtcacatcgaccactgaagttgaagtgatagatctgatgact
ccatcaccgacatgcagagttggatcgtctatgaagaggccaagagtttctgagtttata
gatctgacaaggtctcctaatttcatagagttgtaa
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