Brassica napus (rape): 106348551
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Entry
106348551 CDS
T04128
Name
(RefSeq) small RNA degrading nuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106348551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106348551
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
RNases
106348551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Phosphodiest
DUF4567
DEATH_SH3BP4
Motif
Other DBs
NCBI-GeneID:
106348551
NCBI-ProteinID:
XP_013643766
LinkDB
All DBs
AA seq
571 aa
AA seq
DB search
MTSSKRKRDAGTAVEDSADGSDKSSTGNSFFDIYGPEAKPELVFKGPETTLNLQDVQGLV
TWVLSEGYMPNWVFIKNKPLIPKVVMLYLPGLDAALYLSQSKALANLKSCCGNPIPLLAL
SCVVDEMNTIDTLLTCKGKKKKKTLTHSVEPPLLVSKPEACNLVGKSFTEVTKDIPFPVT
YYTLSRKEMEQNGYNFKTEFISTLPAPSGSCPQEILALDCEMCTTKDGSELTRVTLVDIQ
GQVLLDKLVKPANHITDYLTMYSGITAEMMEGVTTTIKDIQEEFLKLVFKETVLVGHSLE
NDLYSLKISHNLVIDTSVLYKHPRSGSHKTKLRVLAKKFLAREIQMSESGHDSVEDAKAA
MDLALMKIKYGPDFGSPPEMMRKKLLDILNESGKTTCIVDSINIVKRYASESSSSVPVSS
DDEALSKAMKEVKKRQSQFVWTQFSELNTHFRNRADDPEKLNARLAEKISLLTCSDDDSG
LKKRRKSKVSPETKEILKKMDERVSALHAALPTNAMFIVCTGHGDTSIVHRVRKMLKEEG
EIEFSREKVVKVLEELQAQAEVALCFVGIKQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctcgaagcgaaagcgcgacgccggaaccgccgtggaagatagtgccgacggt
agcgacaagagcagtactgggaacagtttcttcgatatatatggacccgaagccaaacca
gaactcgttttcaagggtcccgaaacaacattgaacttacaagatgttcaaggacttgtg
acatgggttctttcagaaggctacatgcccaattgggttttcatcaagaacaagcctcta
attccaaaggttgtcatgctctaccttcctggattggatgcagctttatacttatcacag
tctaaggcacttgctaatttgaaatcatgttgtggcaatcccataccgcttttagctttg
agctgtgtagttgatgagatgaacacgatcgatacgctacttacttgcaagggtaaaaag
aagaagaaaactcttactcattcagtggaaccacctctcctagtatctaagccagaagca
tgcaatctggtgggtaaatcgttcactgaggtgacgaaagatataccattccctgttaca
tactatactctaagtcgaaaggaaatggaacaaaacggatacaattttaagacagagttt
atttctacacttcctgcaccatcaggatcatgtccccaggaaattttggctcttgattgc
gagatgtgtactacaaaggatggttcggagttgacaagagtgacgctagtggatatccaa
ggacaggttctattagataaattagtcaaaccagcaaatcatatcacggattaccttaca
atgtatagtggaataacagctgagatgatggagggagtaacaacaactattaaagacatt
caggaagagttcttgaagctggttttcaaagagacagtattagtcggacactcgttggag
aatgacttgtattctctgaaaatctctcataacctggtgattgacacttcagtgctatac
aagcatccacggtctgggtctcataaaacaaaactccgagttttagcgaaaaagtttctt
gctagagagatacagatgtctgaatctggacatgacagcgtcgaggatgcaaaggcggcc
atggatttggcactaatgaagataaaatatggacctgactttggttcaccaccggagatg
atgagaaagaagctccttgacattttaaacgagagcgggaaaaccacttgtattgtagac
agtatcaacattgtaaagagatatgcttctgagtcatcaagttcagttccagtttcttcc
gatgacgaagcactttcaaaggccatgaaggaggtgaagaagaggcagtcacaattcgtc
tggacacaattctcagaactaaatacacatttccggaacagagcggatgatccagagaaa
ctaaatgccagactagcagagaagatctcgttgctgacatgtagcgatgatgattcaggc
ctcaagaaacgccgcaaaagcaaggtttcacctgaaacgaaggaaattttaaagaagatg
gatgaaagagtcagtgcccttcacgcagcattaccaacaaatgcaatgtttatagtttgt
accggacatggagacacatccattgtacacagagtgcggaaaatgcttaaagaggagggt
gaaattgagtttagccgtgagaaagttgtgaaggttcttgaagagcttcaagcacaagcc
gaagtagcgctttgttttgtaggtatcaagcaataa
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