Brassica napus (rape): 106348593
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Entry
106348593 CDS
T04128
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106348593
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
106348593
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
106348593
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
106348593
NCBI-ProteinID:
XP_013643839
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Position
A1:1414699..1417437
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AA seq
578 aa
AA seq
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MKIVTYNVNGLRQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTSDLTIAEGYESFFS
CTRTCEKGRTGYSGVATFCRVKSASLSCEVALPVAAEEGFTGLVNSGLRGGRSGSSVVAE
GLEECEKDKLLRVDQEGRCVITDHGHFVVFNVYGPRAVADDAERVEFKHRFYDVLERRWE
CLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVFRFKHP
ERKDAFTCWSSSSGAEQFNYGSRIDHILVAGPCLHEEGDGQQGHSFLACHVKECDILTEY
KRFKNETMPTRWKGGLGVKLKGSDHVPVFTSFDDLPDVPEHSTPPLASRYLPMIFGFQQT
LASVLMKRQANEQAKSIEVSCSSLSQSSTTPSCGEISTGPLRNCSSTDISPEESCSLENE
SSKRVNTTSEDGNKKKVRRIQSSQQLSLKSFFTSKSASCVSSSQSSSQVESNTEPTDSSK
EDDELTTTSSQEQDQSGSPAKQKNDAALMEWQRIQNLLQNSIPLCKGHKEACVARVVKKP
GPTFGRRFYVCSRAEGPSSNPEANCGYFKWASSKFRDK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacttacaacgtcaatggccttaggcaacgtgtttcccagttcgattcc
ctcctcaaactcctcgattccttcgacgcagacatcatctgcttccaggaaacgaagctc
aggaggcaagaactaacatcagatttgacgatagccgaaggttacgaatcgttcttctcg
tgcactcgcacgtgcgagaaaggtcgtaccggttactccggtgtagcgacgttctgtagg
gtaaagtcagcgtctttaagctgtgaagttgctttgcctgttgctgctgaagaaggcttc
actggtcttgttaacagtggcttacgaggtgggaggagtggtagttctgttgtagctgaa
ggtcttgaggagtgtgagaaagataagcttcttagggttgatcaagaggggcgttgtgtt
ataactgatcacggacattttgttgtttttaatgtttatggaccgagagctgtagctgat
gatgctgagagggttgagtttaagcatcggttttatgatgttttagagagaaggtgggag
tgtcttctgcgtcaaggaagaagggtatttgttgttggggatctcaacattgctcctttt
gctatggatcggtgtgaagctggccctgatttcgagaaaaacgaattcagaaagtggttt
agatccctgttagttgaacgtggaggctccttctctgacgttttcagatttaaacatcct
gaaaggaaagatgcattcacatgttggtcttcaagtagtggagcagaacaatttaactac
ggttcaagaattgatcatatcttagttgctggaccatgcttgcatgaagaaggcgatggt
caacaagggcatagttttttagcttgccatgttaaggaatgtgacatattaacagagtat
aagcggtttaagaatgaaactatgccaacaaggtggaaaggtggattgggtgtgaaacta
aagggatcagaccatgtacctgtcttcacaagttttgatgatttgcctgacgtcccagaa
cacagcacacctcctttagcttcaagatatcttcccatgattttcggtttccagcaaact
cttgcgtcagtgttaatgaaaagacaagctaatgagcaagccaagtccattgaggtttca
tgttcatcattgagtcaaagtagcactacaccaagttgtggagagatctcaacaggacca
ctcagaaactgcagttcgacagatatttcacctgaggaatcttgttctttagaaaatgaa
tccagtaagagagtaaacacaacatctgaagatggaaacaagaagaaagtgaggaggatc
caatcatctcagcagctttctctcaagtcttttttcacttcaaaatctgcttcatgtgtt
tcctcaagtcagagctcctcccaagtcgagagcaatacagaaccgactgactccagcaaa
gaagacgatgaacttactactacttcatcacaggaacaagatcaaagcggttctcctgct
aagcagaaaaacgatgcagcattaatggagtggcagagaatacagaacctactgcaaaac
agcatccctctctgcaaaggacacaaagaagcttgtgtagctcgagttgtaaagaaacca
ggtccaacatttggacgcagattctacgtctgctctcgagctgaggggccttcctctaat
ccagaagcaaactgtggttatttcaaatgggcttcatccaaattccgagacaagtag
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