Brassica napus (rape): 106348594
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Entry
106348594 CDS
T04128
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106348594
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106348594
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106348594
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106348594
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
106348594
Ion channels [BR:
bna04040
]
Chloride channels
Chloride channel (CLC)
106348594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
106348594
NCBI-ProteinID:
XP_013643812
LinkDB
All DBs
Position
A6:22482583..22488058
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AA seq
792 aa
AA seq
DB search
MLSNHLQNGIESDNLLWSRVPDSDDASTDGVGLLSSPRDGGGGVDSLDYEVIENYAYREE
QAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWKFALTFAIIQKSYFAG
FIVYLVINLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNGIDIPGTLLFRTLIGKIFGSI
GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHFNSRWPQLFKSDRDRRDLVTCGCAA
GVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGICGHFGG
GGFIIWDVSDGQDDYYFKELLPMAVIGVIGGLLGALFNQLTYYMTSWRRNYLHKKGNRVK
IYEACIISCLTSTISFGLPLLRKCSPCPETVTDSGIECPRPPGMYGNYVNFYCKTDNEYN
DLATIFFNTQDDAIRNLFSAKTMREFSAQSLLTFLAMFYTLAVVTFGTAVPAGQFVPGIM
IGSTYGRLVGMFVVRFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLL
PLIMLVLLVSKAVGDAFNEGLYEVQARLKGIPLLESRPKYHMRQMIAKEACQSQKVISLP
RVIRVADVASILRSNKHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCD
PSARPIMHRFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKV
YNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENGESSAVELQQSTSVRGRYSETATRT
DAGRPLLDDLLG
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgaatcatctacagaacgggatcgaatccgataacctcctctggtctcgcgtc
cctgactccgacgatgcttccaccgacggcgttggcttactcagctccccccgtgacggc
ggcggtggcgttgatagtcttgattacgaggttatcgagaattacgcttacagagaagaa
caggcgcatagagggaagctttacgttggttactacgttgcagtcaagtggttcttctcg
ttactcatcgggatcggaactggattggctgctgttttcattaatctctcggttgagaat
ttcgctggatggaagtttgctctgactttcgccatcattcagaagtcttactttgcgggg
tttattgtttaccttgtcatcaatctagtcttggtgttttcttccgcgtatattattacg
cagttcgctcctgctgccgctggctctggcattcctgagatcaagggttatctcaatgga
attgatattcctggtaccttgctctttagaactcttatcggaaagatatttggaagcatt
ggttctgttggaggtggcttagccttggggaaagaaggtccccttgtacatacaggtgct
tgcattgcatctttgcttggtcagggtggatctaccaaatatcattttaactctagatgg
ccgcagctttttaagagtgacagagatcgtcgtgatcttgtcacttgtggatgtgcagct
ggagttgctgcagcttttagagctccagttggtggagtgttatttgcgttagaggaggtc
acatcatggtggagaagtcaacttatgtggcgtgtctttttcacatctgctatcgtggct
gttgtggtgcgtactgccatgggatggtgcaagagtggaatatgtggacattttggtgga
ggtggtttcattatatgggatgtatcagatggtcaagatgactactacttcaaggagcta
ctaccaatggctgtaattggagttatcggaggcctacttggggcattatttaaccaactt
acatactatatgacatcttggcgtcgaaattatttgcacaagaaaggaaatcgagtgaag
atatatgaagcatgcatcatctcttgcttaacttcgacaatctcatttgggctgccactc
ctaaggaaatgcagtccatgccctgaaacagttactgactctggtattgaatgtccacgg
cctcctggaatgtatgggaattacgtaaatttctactgcaagacggataacgaatacaat
gatctcgccacaattttcttcaatactcaggatgatgctataaggaatttgttcagcgca
aaaacaatgcgagaattcagtgctcagagtctactgacttttttggctatgttttatacg
ttagcagtggtgacatttggcacagctgttcccgctggccagtttgtccctggaataatg
ataggatcaacttatgggcgccttgtaggcatgtttgtagtcaggttttacaagaagctc
aacattgaagagggaacttatgctttgctgggagctgcttcatttcttggaggctcgatg
cggatgactgtatctttatgtgttatcatggttgaaatcacaaacaacctgaaacttctg
cctcttataatgttggttcttctcgtttcaaaggccgtgggtgatgctttcaatgaggga
ttgtatgaagtacaagcacgccttaagggcattccgttactggaatcgagacccaaatat
cacatgcggcaaatgatagcgaaggaagcatgtcaaagtcagaaggtaatttctttacct
cgagttatcagagttgcagatgtcgcttcaattttgcgcagcaacaaacacaatggattt
ccggtgatcgaccacacgagaagtggtgaaacacttgtcattgggttagttcttcggagt
cacttgcttgtactccttcaatctaaagtggattttcaacatagtcctctgccttgtgat
ccaagcgccagaccgatcatgcacagatttagcgagtttgctaaacctgtttcatctaaa
gggttatgcatagaggatatacatctaacttcagatgatttagagatgtatatagatctt
gctccatttctgaatccgtctccatacgttgttcctgaagacatgtcgttgacaaaggta
tacaacctttttcggcaacttggattgagacatctatttgttgttcctcgtccttctcgt
gtgataggcttgatcacaagaaaggatttgctaattgaggaaaacggggaatcatcagct
gttgaactccaacagtcaactagtgtaagaggtcggtacagtgagacagcaacgcggacg
gacgctggacgtccgcttctagacgatctcttaggctag
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