Brassica napus (rape): 106348681
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Entry
106348681 CDS
T04128
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106348681
03400 DNA repair and recombination proteins [BR:
bna03400
]
106348681
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106348681
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
106348681
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
106348681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
UBA_7
ResIII
UBA
Utp25_C
Motif
Other DBs
NCBI-GeneID:
106348681
NCBI-ProteinID:
XP_013643922
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All DBs
Position
C7:complement(42602700..42607214)
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AA seq
858 aa
AA seq
DB search
MDKLDSCFDEAVMKLVEMGFTKPDAVEAVKAVGKSCGDAVEYLLNRTGGFSSASSLCSTK
SNSNKTLGKRALPSSFSSGSMRQSSLFDHFRSVDRNKKKGGSFGTSVVSDPSEEMIKPPP
LVFTESSGCSEASSTWEKRVDSILRIRFGISSLKSFQREALSTWVAHKDCLVLAATGSGK
SLCFQLPALLTGKVVVVISPLISLMHDQCLKLSTHKVSACFLGSGQLDNRIEQKAMQGMY
QIIYVCPETVVRLIKPLQKLAKTHGIALFAIDEAHCVSKWGHDFRPDYRKLSMLRENFCV
SSLAFLEYDVPIMALTATATAHVQEDILQSLHLSKETKTVLTSFFRPNLQFSVKHSRTKS
AASYAKDFQNLTDLYSGKRKATGKKLAVISLESEGQNDFGYHDAESIHETDNDDDDEEDP
ENSLAKQNSSNGKEMSEEYLEDETDIFQSVDDWDVACGEFCAMSPCDVLDIPDPSGKQTP
DECGHNHSNKAKNLEGPTIIYVPTRKESVNIAKYLCGVGLKAAAYNAKLPKKHLRQVHQE
FHEDKLQVVVATIAFGMGIDKKNVRKIIHYGWPQSLEAYYQEAGRAGRDGELAECVLYAN
LSRVPTLLPSRRSKEQTEQAYKMLSDCFRYGMNTSQCRAKILVEYFGEDFTSKKCNLCDV
CTKGPPEQVNVREEANLLFQVISAFHLQAETSSEHASYEDYGLGNSKQKKLSYKPNLFFF
ISRIREQSQKLMEIDRLWWKGLARIMEAEGYIKEMDNKSRRVEIAFIEPTEKGRKQLAFE
DDKPLYVYPEADMLVSLKQRRTYSGFSSWGKGWADPEIRRQRLETMKRPRERKPRRERSR
QQQRPLKLQKNLPWKSKE
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggataagctagattcgtgtttcgacgaggctgtgatgaagcttgtcgaaatgggtttt
acaaaaccggatgctgtggaagctgtaaaagctgtagggaagtcatgtggtgacgctgtt
gagtatcttctgaatagaactggtggattctcttctgctagttcactatgttctacaaag
agtaatagtaacaagacccttggcaagagagctttgccctcttcgttttcctccggttca
atgcgacagtcgagtctgtttgaccattttagatccgtggatcggaacaagaagaaaggt
ggcagctttgggacttcagtagtgtctgatccttcagaagagatgataaagcctcctcct
ttggtgtttactgagtcaagtggttgctcagaggcttcatcaacttgggagaaaagagtt
gattccattctacgaatccggtttggtatttcgtctctgaaaagtttccaaagggaggct
ttgtcaacatgggttgctcataaggactgtcttgttctagctgcaacaggatctggaaaa
tctctttgcttccagcttcctgcattactgacgggaaaagttgttgtcgtgatctcgcca
ttgataagcctgatgcatgatcagtgccttaagctatcaacgcacaaagtctctgcttgt
tttcttggttcaggccaacttgataatcgtatagaacagaaggcaatgcagggaatgtat
cagatcatatatgtctgtcctgagacagtggttcgactgattaaaccactccagaagctt
gccaaaactcatggaattgctctttttgctattgatgaagctcattgcgtatcaaagtgg
ggacatgattttcgtccggactataggaaactatctatgttgcgggaaaacttttgtgtc
agcagtttggcattcttggagtatgatgtgccgataatggcattgactgcaacagccaca
gctcacgtacaggaagatattcttcagtcacttcacctgtcaaaggaaacaaaaactgtt
ctcacttcatttttcaggccaaatttgcaattttcagttaaacatagtcgaacaaagtct
gcagcttcatatgcaaaagacttccagaacttaactgacttatactctggaaagagaaag
gctaccgggaaaaagctagcagtaatctcattagagtcagaggggcagaatgattttggt
tatcacgatgctgaaagcattcatgagacagataacgatgatgatgatgaagaggatccg
gagaactctttggcaaagcaaaacagttcaaatgggaaagaaatgtcagaagagtatctg
gaagatgagaccgacatcttccagagtgttgacgattgggatgttgcttgtggcgagttc
tgtgcaatgtctccttgtgatgtcctggatattcctgatccttccggaaagcagacacct
gacgaatgtggacacaatcatagtaacaaggcgaagaatcttgaaggaccgacaattatt
tacgttcctacaagaaaggagagtgtaaacattgcaaagtatctctgtggggttggactg
aaggctgcagcttataatgcaaagttgccaaaaaaacatctgagacaagttcaccaagaa
tttcacgaagataagctgcaggttgttgttgccacaattgcgtttggaatgggaattgac
aagaaaaatgtccggaaaatcatccattatggttggccgcagagcttggaagcatactac
caagaagctggtcgagctggaagagatggggaattggctgagtgcgtgctctatgctaat
ctatcgagagtaccaacacttttgccgagccgtaggagcaaagaacagacagaacaagct
tacaagatgctatctgattgcttcagatacggaatgaacacttcacagtgtcgagcgaaa
atactcgtggagtactttggggaggatttcacttccaagaagtgtaacttatgcgatgtt
tgcactaaagggcctccagagcaagttaatgtacgagaggaagctaatcttttgtttcaa
gtaatctctgcctttcacttgcaggcagagactagctctgagcatgcatcatatgaagat
tacggactcggcaacagcaaacagaagaagttatcttacaaaccgaatcttttcttcttc
atcagtagaatcagggagcagtcccaaaaactcatggagatagatcgtctttggtggaaa
ggtcttgcccgtatcatggaagccgagggatacatcaaagagatggacaacaagtctcgt
cgagttgagatagcttttatagaaccaacagaaaaggggaggaagcaactagctttcgaa
gatgacaagccactttatgtatacccagaagcagacatgctggtttcattgaaacaacgc
agaacatacagcggattctcatcttggggcaaaggatgggcagatccagagatcagacgc
caacggttagagacaatgaaacgcccaagagaaaggaaaccacgaagagaacgatcacgt
caacagcaacgtcctttgaagttacagaagaatcttccatggaaaagcaaagaataa
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