KEGG   Brassica napus (rape): 106348720
Entry
106348720         CDS       T04128                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
bna  Brassica napus (rape)
Pathway
bna03030  DNA replication
bna03410  Base excision repair
bna03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106348720
   03410 Base excision repair
    106348720
   03450 Non-homologous end-joining
    106348720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bna03032]
    106348720
   03400 DNA repair and recombination proteins [BR:bna03400]
    106348720
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    106348720
DNA replication proteins [BR:bna03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    106348720
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     106348720
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     106348720
Exosome [BR:bna04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106348720
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N DUF3231 HHH_5
Other DBs
NCBI-GeneID: 106348720
NCBI-ProteinID: XP_013643973
LinkDB
Position
C7:42947790..42951679
AA seq 418 aa
MGIKGLTKLLADNAPSAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRAGTEMLTNEAGE
VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLSGAIEAGN
KEDIEKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKAGKVYGVASED
MDSLTFGAPKFLRHLMDPSSRKIPVMEFDVAKILEELQLTMDQFIDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIETILENINKERYQIPEEWPYNEARKLFKEPDVLTDEEQLDIKW
TSPDEEGIVQFLVNENGFNIDRVTKAVEKIKSAKNKSSQGRLESFFKPIASSSVPAKRKG
TKCLLRQYKPAISNKMSSVHAFGCNTSSNNIVSLRLFPLIPGSNLSVQMAGAGICTRF
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgggtatcaagggtttaacgaagcttttagccgacaatgcgcctagcgccatgaaagag
cagaagttcgagagctacttcggtcggaaaatagctgttgatgcaagcatgagcatttac
cagttccttattgtggtggggagagctgggactgagatgctcaccaacgaagctggtgaa
gtcactagccatttgcaagggatgtttaatcgaaccattcgtcttctcgaagctggaatt
aagcctgtgtatgtttttgatggaaagcccccggagttaaagagacaagaactagccaaa
cgttactccaagagagccgatgcaactgcagatttgagtggtgcaattgaggcaggaaac
aaggaggacattgagaagtacagcaaacgaactgtgaaggtgacaaagcaacacaatgac
gactgcaaaagactcttgaaactcatgggggtccccgtcgttgaggccacttccgaggca
gaagcgcaatgtgctgcactttgcaaagcaggaaaggtgtatggtgtggcttctgaagat
atggactccttaacttttggagctcctaagtttcttcgccacctgatggatcccagctcc
agaaagatccctgtcatggaatttgacgttgccaagattttagaagagcttcaacttacc
atggatcagtttatcgatttgtgcatattgtcaggatgtgactattgtgacagcatccgt
ggtatcggagggcagactgccttaaagctcattcgccagcatggatctattgagactatt
ctcgaaaatataaacaaagaaaggtatcagatacccgaggaatggccatataatgaagct
cgtaaactttttaaagaacccgatgtcttaactgatgaagagcagcttgatatcaagtgg
acttctccagatgaagagggaatagttcagtttttggtgaatgaaaatggattcaacata
gatagggtaaccaaggctgtcgagaaaatcaaatctgcaaagaacaagtcatcccaggga
aggttggagtcatttttcaagccaatcgctagctcatccgtgcctgctaaaagaaagggt
accaaatgcttactccggcagtataaaccagctatcagcaataaaatgtcctctgtgcat
gcttttggatgtaacacctcctccaataacattgttagccttaggctgttccctctaatc
ccgggttccaacctctctgttcaaatggctggagctggcatatgcacaagattctaa

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