Brassica napus (rape): 106348763
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Entry
106348763 CDS
T04128
Name
(RefSeq) small RNA degrading nuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106348763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106348763
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
RNases
106348763
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Phosphodiest
Motif
Other DBs
NCBI-GeneID:
106348763
NCBI-ProteinID:
XP_013644022
UniProt:
A0A816MV14
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All DBs
Position
C7:43234635..43237874
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AA seq
568 aa
AA seq
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MTSSKRKRDAVEDSADGSDKSSTGNSFFDIYGPEAKPELVFKSPETTLNLQDVQGLVTWV
LSEGYMPNWVFIKNKPLIPNVVMLYLPGLDAALYLSQSKALANLKSCCGNPIPLLALSCV
VDEMKTIDTLLTCKGKKKKKTLTHSVELPLLVSKPEACNLVGKSFTELTKDIPFPVSYYT
LSQKEMEQNGYNFKTEFISTLPAPSRSSPHEILALDCEMCTTKDGLELTRVTLVDIHGQV
LLDKLVKPTNHITDYLTMYSGITAEMMEGVTTTIKDIQEEFLKLVFEETVLVGHSLENDL
YSLKISHNLVIDTSVLYKHPRSGSYKPKLRVLSKKFLAREIQMSESGHDSVEDAKAAMDL
ALMKIKYGPDFGSPPEMMRKKLLDILNESRKTTCIVDSINIVKRYASESSSSVPVSSDDE
ALSKAMKEVKKRGSQFVWTQFSELNTHFQNRADDPEKLNSRLAEKISLLTCSDDDSGLKK
RRKSKVSPETKEILKKMDERVNALHAALPTNAMFIVCTGHGDTSIVHRVRKMLIDEGENE
FSREKVVKVLEELQAQAEVALCFVGIKQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctcgaagcgaaagcgcgacgccgtggaagatagtgccgacggtagcgacaag
agcagtaccgggaacagtttcttcgatatatatggacccgaagccaaaccagaactcgtt
ttcaagagtcccgaaacaacattgaacttacaagatgttcagggacttgtgacatgggtt
ctttcagaaggctatatgcccaattgggttttcatcaagaacaagcctctgattccaaat
gttgtcatgctctaccttcctgggttggatgcagctttgtacttatcacagtctaaggca
cttgctaatttgaaatcatgctgtggcaatcctattccgcttttagctttgagctgtgta
gttgatgagatgaagacgatcgatacgctacttacttgcaagggtaaaaagaagaagaaa
actcttactcattcagtggaactacctctcctggtatctaagccagaagcatgcaatctg
gtgggtaaatcattcacagagctcacaaaagatataccattccctgtttcatactacact
ctaagtcaaaaggaaatggaacaaaatggatacaattttaagacagagtttatttctaca
cttcctgcaccatcaagatcatctccccatgaaattttggctcttgattgcgagatgtgt
accacaaaagatggtttggagttgacaagagtgacgcttgtggatatccatggacaggtt
ctattagataaattagtcaagccaacaaaccatattacagattaccttacaatgtacagt
ggaataacagctgagatgatggagggagtaacaacaactattaaagatattcaggaagag
ttcttaaagctggttttcgaagagacagtattagtcggacactccttggagaatgacttg
tattctctgaagatctctcataacctggtgattgacacttcagtgctatacaagcatcca
cggtctggatcttataaacctaaacttcgagttctatcgaaaaagtttcttgctagagag
atacagatgtctgaatccggacatgacagcgtagaggatgcaaaggcagccatggatttg
gcactaatgaagataaagtatggacctgactttggttcaccaccggagatgatgagaaag
aagctccttgacattttaaacgagagcaggaaaaccacttgtattgtagacagtatcaac
attgtaaagagatatgcctctgagtcatcaagttcagttccagtttcttctgatgacgaa
gcactttcaaaggccatgaaggaggtaaagaagaggggatcacaattcgtctggacacaa
ttctcagaactaaatacacatttccagaacagagcggatgatccagagaaactaaattcc
agactagcagagaagatctcgttgctgacatgtagcgatgatgattcaggcctcaagaaa
cgccgcaaaagcaaggtttcacctgaaacgaaggagatcttaaagaagatggatgaaaga
gtcaatgcccttcacgcagcattaccaacaaatgcaatgtttatagtttgtaccggacat
ggagacacatccattgtacacagagtgcggaaaatgcttatagacgagggtgaaaatgag
tttagccgtgagaaagttgtgaaggttcttgaagagcttcaggcacaagccgaagtagcg
ctctgttttgtaggtatcaagcaataa
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