Brassica napus (rape): 106348921
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Entry
106348921 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106348921
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106348921
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106348921
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106348921
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106348921
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
106348921
NCBI-ProteinID:
XP_013644216
LinkDB
All DBs
Position
C7:complement(49758137..49763243)
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AA seq
1013 aa
AA seq
DB search
MLIVLDLGLSSLFLLISLVLPVVAFVVRRKWRLAALRREEIRRLLIHASEEAARAELESS
VEFSSVYVPNSFQCPVCYSPASTRCSRCKAVRYCSGKCQIIHWRQGHRDECHPASVLYNT
DDEKSDCDLKFREGNEGLTPDETLLLHTEQATTVQVREAILSNPVSSPEDGGGESADNKD
ELMDKEEAVSVAETSGSSFSGFSSSPRNDSGDDDISFCESSSSSDSEISEPPRDAHVSVE
SEETCFSNIDDVKSKPLSPKFVQLVESANDLAKLPKLSLNKPGGDAGQKPSQSSSLVSSV
GTDGHPRSADPSLMKSSDFWGTALGSVERVTENCDGSKSGEPGKSSLHLSLGSSRDISAA
EVSHKNKNSEETTRAALGTRKFSGGVNLKERIAKRSDEAEISLPRSSSLDAPSHLNPTVL
STVTLQKSKSTSAGSGFMLAPMKVGEVQRLSSKASDTRECADAMKHSALGAKSGRVLDHQ
KQNGVAVHPINSLNGRSGMKASLLKAVDQWTRPKSLAENEIAGNHSHKGLFSYELFSKLY
TSKIEFQPCGLINCGNSCFANVVFQCLMFTAPLTTYFLQQLHSRTCPNKEQCFTCGFEKL
VLKAKEGKSSLSPNGLLSQLQSIGIRLGNGKQEDAHEFLRFVVDTMQSVCIKASGYDMPK
TKKLEDTTLIGLTFGGYLRSKIKCMKCQEKSERLEKMMDLTVEIDGDISTLEEALRRFTR
TEILDGENKYKCGRCKSYERAKKKLKITEPPNVLTIALKRFQSGKFGKLNKLIRFPENLD
LTPYVSGGSEKSHDYKLYGVIVHLDTMNAAFSGHYVCYVRNSQNKWYKADDSTVVTSDVE
RVLTKGAYMLFYERCSPMPPRLVVCNKSEASNKKGSVPVPKTTVSRSVSTASHVLSSNTP
GGDRPGNIQSFYSSFQRLQRILEEDSSSDSSSLFDSTSDECSCSTDSTSMDDFADFIFGD
NQGRAHGQSEAPSPTSSSSSSSPPFTRHSRLGDSSRSSQETCRNSRHRVSLGR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgctcatagttctggatctcgggctttcaagtctattccttttgatctctcttgttcta
cctgtagtcgccttcgttgttaggcggaaatggaggctggctgctctgagaagggaggag
attcggagacttcttatccatgcgtcagaggaggctgctagagctgagctagagtcctcc
gtcgagttctcttcggtttatgtccctaatagcttccagtgtcctgtgtgctattctcct
gcctctactcgttgctctcgctgcaaagccgttcgctattgttccgggaaatgtcaaatt
atccactggcggcaaggtcacagagatgaatgtcatcctgcttcagtcttatataataca
gatgatgagaaaagtgactgtgatttgaagttcagagaaggaaatgaagggcttactcct
gatgaaactctattgctgcatacagaacaggctactactgtacaagtcagggaagcaata
ctctctaatcctgtctcatctcctgaagatgggggtggagaaagtgcagacaacaaagat
gaacttatggataaggaagaagctgtttccgttgcggaaacatctggatcatccttttct
ggcttctcctcttcccctcgtaatgactctggtgatgatgatatttctttttgtgagagc
tccagttcatctgattccgagatatcagagcctccacgtgatgctcatgtttctgtagag
tcagaggagacctgtttcagcaatattgatgatgtgaaatccaaaccgttgtctcctaaa
tttgtgcagttggttgagtctgcaaatgaccttgctaagttacctaagttgagtctgaat
aaacctgggggcgatgcggggcagaaaccgagccaatcaagtagcttagtctcttcggta
ggtacggatgggcatccacgatcagctgatccgtctcttatgaagtcatctgatttttgg
ggtactgctcttggatcagtagaacgtgtaactgagaattgtgatggttctaaatctggt
gaacctggtaaatcttctctgcatttatcacttggctcctctagggacatctcagctgct
gaagtttctcataagaataaaaattcagaagaaactactagggctgctttagggactcgt
aaattttctggtggagtaaatttaaaagaaagaattgccaaaagatctgatgaagctgaa
atttctttaccaagatcctcttctcttgatgcgccgagtcatttgaatcccactgtttta
tccactgtgacacttcagaagtcaaagagcaccagtgctggaagcggctttatgttggcc
cctatgaaggttggggaagtccaacgtttgtcatccaaggcctcagatactagggagtgt
gctgatgctatgaaacattctgctctaggtgcaaaatctgggagagttcttgaccatcag
aaacagaatggggttgccgttcaccctataaattctctaaatggaagaagtggcatgaag
gcgtcgctactgaaagctgtagaccagtggactagaccgaagtcattagctgagaatgag
atagcaggaaaccatagtcataaggggctcttttcatatgaattattttctaagctgtat
acaagtaaaattgagttccagccttgtggcctcatcaattgtggcaatagctgctttgct
aatgttgtcttccaatgcctgatgttcactgctcctctgaccacatacttcctccaacaa
ctccattctagaacatgtccaaacaaagaacagtgcttcacctgtgggtttgagaagctg
gtcttaaaggcaaaagaagggaagtcttcactgtcccctaatgggttgctatcacagctg
cagagtattggaatccgtcttgggaatggcaagcaagaagatgcgcatgaattccttagg
tttgttgtcgacacaatgcagtctgtgtgcattaaggcatctggatacgatatgccaaag
actaagaaattagaagatactactctcattggtttgacattcggtggatacctccgatca
aagattaaatgcatgaaatgtcaagaaaaatctgagcggcttgagaaaatgatggatctg
acagttgagattgatggtgatatcagcacattggaggaggctttgcgtcgatttacaaga
actgaaatattggatggagaaaacaaatataaatgtggcaggtgtaagtcctatgagaga
gccaaaaagaaactgaaaatcacagagcctccgaatgtccttacaattgcactaaaacga
ttccagtcaggaaaattcgggaagctaaataagttgattaggtttccagaaaatctagat
ttgactccatatgtcagcggtggaagtgaaaaatcacatgactacaaactctatggagtt
attgttcacttggatacaatgaatgcagcattttctggtcactacgtgtgctatgttaga
aacagtcaaaacaagtggtacaaagctgatgatagcacggtagtaacgtctgatgttgaa
agggtattgacaaagggagcgtatatgttgttctacgaaaggtgctctccaatgccacca
agattggtagtatgtaacaaatctgaagcatccaataaaaaaggcagtgtgccggtacct
aagactactgtgtcacggtctgtgtctactgcaagtcatgtgttgtcttccaacactcct
ggtggtgatcgacctgggaatatacagtcgttttactccagcttccagaggctgcagaga
attttggaagaggactcgtcgagtgacagttcttctctctttgacagcacctcagatgaa
tgctcttgtagcacggacagtacaagcatggacgactttgctgatttcatttttggagat
aatcaaggacgggctcatggacagtccgaggctccctctccgacatcatcatcttcctcg
tcttctcctcctttcacaaggcattcgcggctaggggactcgagtcgttcttctcaagaa
acttgcagaaactcgagacatcgcgtgtccttgggaagatag
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integrated database retrieval system
