Brassica napus (rape): 106348956
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Entry
106348956 CDS
T04128
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-1
KO
K03265
peptide chain release factor subunit 1
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106348956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106348956
03012 Translation factors [BR:
bna03012
]
106348956
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106348956
Translation factors [BR:
bna03012
]
Eukaryotic type
Release factors
106348956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
106348956
NCBI-ProteinID:
XP_022562018
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Position
C7:complement(41170092..41172645)
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AA seq
434 aa
AA seq
DB search
MGDNHGDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNDEGKEKKVTIDFEPFKPIN
NTLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLAAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVEDTLNALDSGAVETLIVWENLDINRYVLKNSTTGETVIKHLNKEQEANTENFKV
DNNDLDVEDKMSLLEWLANEYKRFGCALEFVTNKSQEGSQFCRGFGGVGGILRYQLDMTA
FDEDLDVYDDDESE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaatcatggtgacgacaagaacattgagatatggaagattaagaagctcatc
aagtcccttgaagctgccaggggcaatggaactagcatgatctccctcatcatgcctccg
cgtgatcaggtttctcgtgtcactaagatgttgggcgatgagtatggaactgcttccaac
atcaagagcagagtcaatcgccagtctgttctgggtgccatcacctctgcacagcaaagg
ctgaaactttacaacagggtccctcccaacggtcttgtcctctacactggaaccattgtc
aacgacgagggcaaggagaagaaggttaccattgactttgagcctttcaagcccatcaac
aacactctctacctctgcgacaacaagttccacaccgaagctctgaatgaactgctggag
tctgatgacaagtttggtttcattgtgatggacgggaacgggactctctttggaactttg
agcggtaacacccgcgaggtgctccacaagttctctgttgatcttccgaagaagcacggg
agaggagggcagtctgctcttcggtttgcgcgtctgcgtatggagaagcgtcacaactac
gtgaggaaaaccgccgagctcgccacgcagtactacatcaaccctgcgactagtcagcct
aatgtgtctggtctgatactcgccggttctgccgatttcaagactgagctgagccagtct
gacatgtttgatccccggcttgctgccaagatactgaacgtggtggacgtatcatacgga
ggagaaaacggtttcaaccaggccatcgagctttcatctgagatccttgccaacgtgaag
ttcatccaggagaagcgtttgataggcaagtactttgaggagataagccaggacacgggg
aagtatgtgtttggcgtggaggatactctgaacgctttggattcaggtgctgttgagacg
ctaatcgtatgggagaaccttgacatcaacagatatgtgttgaagaacagcaccactggt
gagactgtgattaagcacctgaacaaggagcaggaagccaacactgagaacttcaaagtc
gacaataacgacttggacgtggaggacaagatgtcgctgctggagtggctggctaacgag
tacaagcgtttcggctgtgcgctggagtttgtgacgaacaagtcgcaggaagggtctcag
ttttgcagagggtttggaggagtaggagggatacttcgttaccagcttgacatgactgca
tttgatgaggatttggatgtttatgatgacgatgaatctgaatag
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