Brassica napus (rape): 106348970
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Entry
106348970 CDS
T04128
Name
(RefSeq) terpenoid synthase 25-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
bna
Brassica napus (rape)
Pathway
bna00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
106348970
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
106348970
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Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
COG3_C
Motif
Other DBs
NCBI-GeneID:
106348970
NCBI-ProteinID:
XP_013644277
UniProt:
A0A078HP04
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Position
A1:26528807..26532001
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AA seq
602 aa
AA seq
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MEALKMCFGLKTLPNVHNGPLCHKTNLSLIPRRLLQNNTPFSKKPTKHLSWVKTESSGDL
ESTRPLTYFSPSTWGDYFLSVPVDDSEFEALEQEIESVMKPEVRDILMCPHNNNKEKIRI
IHLLISLAIAHYFGSEIEEILHQAFLKLDDLISEENDLETIAIMFEVFRLYGHKMSCDVF
ERFKGEDGKFMESLVHDVRGMLQLYEAAHLGLPSEDIMDNALTFTRHHLGLLTGQETSPN
LCKQIQRALYRSRYNNIEIVVARQYISFYDQEEGHDKTLLKFAKLNFNFCQMHYIKELKL
ITKWWKDLGMASQLSYIRDRSVEIYFGMLGMFFEPRYSLGRIHTVKLTMVLTVVDDTCDA
YATLPEVISLHDAFQRWDLGATEELPSYMRIIYQSVLDTFEYIDREMKARGKFGTMKPII
DDTKNLLRLYAKTAKWARAGHVPSFEDYMEVGISTAGLHGLSAYGYISMDDCDQRQLNEW
FNSKPKIFKALNTAFRLRNDIATFEQEVGRGEVANGVNCYMKQHGVTKEEAVEVLSKMER
ENYKILREEFVVSKDVPRQILLRPVNIARVLDSYYKDGDGFSHPDQNLRDLVTSLFLRPI
PL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggaagcattaaaaatgtgttttggtcttaaaactctccctaacgttcacaatggccct
ctctgtcataagaccaacctctctctcattccccgccgtttgcttcaaaacaacactcct
ttttccaagaaacccacaaagcacttgtcatgggtaaagactgagagtagtggcgacctt
gagagtactcgtcccttgacctacttttctccatctacttggggagattacttcctctct
gttcccgtcgatgactctgaatttgaggcacttgagcaagaaattgaatctgtaatgaag
ccagaagtaagagacatcctcatgtgtcctcacaataataacaaggagaagattcgtatt
atccatttgcttatcagcctcgctatcgctcattattttgggagcgaaatagaagagatt
ctacaccaagctttcctaaagttggatgacttaatttcagaagaaaatgacctggaaaca
attgcaatcatgtttgaagttttcaggctatacggacacaagatgtcttgcgatgtgttt
gagagatttaaaggtgaagatgggaaattcatggaaagtctggtacatgatgttagagga
atgctacaattgtatgaagcagcgcatctcggactaccatctgaagatataatggacaat
gcattgactttcacgcggcatcacttggggttgttgactggccaagaaactagcccaaat
ctctgtaagcagatacaacgtgcactgtatagatctcgatataataacatagagatagtg
gtcgcacgacaatacatatctttctacgaccaggaggaaggccacgacaagacccttctc
aagtttgcaaagctcaacttcaacttttgccaaatgcactacatcaaagagcttaagctt
atcaccaaatggtggaaagatctaggtatggcgtctcagctatcttacataagggaccga
agcgtggagatctattttgggatgctaggaatgtttttcgagccacgatattcacttgga
agaattcataccgttaaacttacaatggtcctcactgttgtggatgatacatgtgatgca
tatgccactcttccagaagttattagtcttcatgatgcttttcagaggtgggatcttggt
gccacggaagaactaccaagctatatgagaatcatataccaaagtgtgttagatactttt
gagtatattgatcgagaaatgaaagctagaggaaagttcggtacaatgaaaccaattata
gatgataccaagaacctgttgagattgtatgcgaagacagcaaaatgggcacgcgcaggt
cacgtgccaagttttgaggattacatggaggttgggatctccacagctggactgcatggc
ttgtcggcctacggatatatatcgatggacgattgtgatcagaggcaattaaatgagtgg
ttcaactccaaacccaaaatatttaaagctttaaatactgcatttcgtcttagaaatgac
attgccacttttgagcaagaagtgggcagaggagaggttgcgaatggcgtcaactgttac
atgaagcaacatggtgttaccaaagaagaagcggttgaagtattgagcaagatggaacga
gagaattataagatactgagggaggaatttgttgtgtcaaaagatgtgccacgacagatt
ctgttgcgacccgtaaacattgctcgagtgctggattcgtattacaaggacggtgatggg
tttagtcatcctgatcaaaacctaagagatcttgttacctctttgttcctccgtccgatt
cctctttga
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