Brassica napus (rape): 106349239
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Entry
106349239 CDS
T04128
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106349239
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106349239
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
WD40_RFWD3
Beta-prop_WDR75_2nd
MIOS_WD40
Beta-prop_Vps41
WD_LRWD1
WDR54
Motif
Other DBs
NCBI-GeneID:
106349239
NCBI-ProteinID:
XP_048618075
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Position
C7:39638195..39641527
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AA seq
507 aa
AA seq
DB search
MENSRPRSVFVDIGLRELNGFRVRKRPFFADSELVCREIASVAVEHDGYRTPPLAVSFCK
SSRNSQVFAVSDEDGHVSLFNSNHKFASSATHQENTDNARFRDWIAHNNAVFDVSWIKDD
SCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL
RCKSTSHEEEFCINSTGMVKGAHLSPLSKRIGRRKAASSSITSVLYLKDEITIATAGAPD
SALKFWDTRKLKVPIAQASPQSDTTNNKEKRAHGIVSLSQDSSGTFLTASCKDNRIYLYN
ILQLDKGPVQSFSGCRIDSFFIRTMISLDGEHILSGSSDGNAYIWQVNKPHVDPTVLKGH
DKEVTAVDWSQSEIGKVVTASDDFTVRLWNIETSRCSNPTASTSRVKRRVTSLSNTDAVE
RLDANKEPESPQKHSSDNHSMPIIRTPEAQTKKISLSSSSTLSLSSLEEDKMCENTPETT
VNSPSSVLNPPSSVKRRTIRDYFLVTP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactccagacccagatccgtcttcgtcgacatcggactaagagagctcaacgga
ttccgagtaaggaagcgaccgttcttcgcagattccgagctggtttgcagagaaatagcc
agcgttgctgtggaacacgacggctatcggactcctcccttggccgtctccttctgtaag
agtagcaggaactcacaagtattcgcggtgtctgatgaggatggacatgtgagcttgttt
aattcgaatcacaagttcgcctcttctgcaactcaccaagagaacacagataatgctagg
tttcgtgactggattgctcataataatgcggtcttcgacgtttcttggatcaaggatgat
agttgtcttctgactgcttctggtgatcaaactattaaagtatgggatgttgaggagaat
aagtgtactggagtacttataggacatacaggaactgtgaaatcaatgtgttcacatcca
acaaactctgatcttcttgtctctggttcaagagatggatgttttgcgctatgggattta
agatgtaagagtacctctcacgaagaggagttttgcatcaactctaccggcatggttaaa
ggagcccatctctctcctctttcaaaacgaattggacgtcgcaaggctgcttcatcaagc
attacctctgtgctttatctcaaggatgagatcacaattgccactgctggagcaccagat
agcgccttgaaattttgggatactagaaagctgaaagttcccattgcccaagcatctcca
cagtcagacacaacaaacaataaggaaaagagagcacatggtatagtgtccctgtcccaa
gactcaagtggaacctttcttacagcatcatgcaaggacaacagaatctatctatacaac
atactgcagcttgacaaaggacctgtacaatctttctctggttgccgaatagattctttt
ttcattaggacaatgattagccttgatggtgagcacattttgagcggttcaagcgacgga
aacgcttacatatggcaggtgaataagcctcatgtagatcctacagtcttgaaaggccat
gacaaagaagtaactgctgtagattggtctcaatcagagatagggaaggtagttacagct
tcagatgacttcacggtacgactgtggaacatagagaccagccgctgctcaaacccaaca
gcatctacttctagagttaaacgcagagtaacctcattgtcaaatactgacgccgtagaa
agacttgatgctaacaaagaacctgagagtccccaaaagcattcatcagataatcattct
atgcctatcatcagaactccagaggctcagacgaagaaaatatcgttatcatcatcatca
acattgtcattatcatcattagaagaagataaaatgtgcgagaatacaccagaaaccacg
gtcaacagtccatcatctgtcctaaaccctccttcctctgtcaaaaggcgaaccattaga
gattacttcctggtcactccctaa
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