Brassica napus (rape): 106349317
Help
Entry
106349317 CDS
T04128
Name
(RefSeq) alpha-mannosidase At3g26720
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
bna
Brassica napus (rape)
Pathway
bna00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
106349317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106349317
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
106349317
Membrane trafficking [BR:
bna04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
106349317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Laman-like_dom
Motif
Other DBs
NCBI-GeneID:
106349317
NCBI-ProteinID:
XP_013644715
LinkDB
All DBs
Position
A6:complement(25144576..25151041)
Genome browser
AA seq
1021 aa
AA seq
DB search
MAVKCFHSFPLHLLLATIVIGVVSSEYIEYNTAPRIVPEKINVHLVPHSHDDVGWLKTVD
QYYVGANNSIRGACVENVIESVIASLLDDQNRKFIYVEMAFFERWWRQQSNAKKVKVKKL
VDSGQLEFINGGMCMHDEATPHYIDMIDQTTLGHQFIKSEFGQVPRVGWQIDPFGHSAVQ
AYLLGAELGFDSLFFARIDYQDRAKRLREKTLEVIWQGSKSLASSSQIFTGVFPRHYDPP
DGFTFEINDVSPPIQDDPSLFDFNVQERVNDFVAAALAQVNVTRTNHIMWLMGTDFRYQY
AYSWYRQMDKFIHYVNKDGRLNVLYSTPSIYTDAKYAANESWPLKTDDFFPYADKPNAYW
TGYFTSRPAFKRYVRDLSGYYLAARQLEFLRGRSSSGPTTDMLADALAIAQHHDAVSGTQ
RQHVAADYALRLSMGYLQAEKLVASSLSFLSASKSSTDEKNPDTKFQQCPLLNISYCPAS
EARLSSGKSLVVVVYNSLGWKREEVVRVPVSSENVIVKDASGKEVVSQILPLSDITLRIR
KEYVKAYLGRSPKDTSKHVLAFIASVPPLGFSSYVISETGRTGRGLSASYVTSGSLNQDV
EVGQGNLKLLYSEEGVKMSRYLSTKSQVTAEQTYAYYIGSNGTDKDPQASGAYVFRPDGS
RPIKSEGQAQLTVVRGPLFDEVHQEFNSWISQITRVYKGKEHAEIEFTVGPIPADDGNSK
EVITKLTTTMKTNGTFYTDSNGRDFIKRVRDFRTDWDLQVYQPVAGNYYPINLGIYMQDK
TSELSVLVDRAVGGSSLEDGQIELMLHRRMLHDDIRGVGEILNETVCLPDGCKGLTIRGK
FYVQIDKPGDGARWRRTFGQEIYSPLLLAFTEQEGDHWINSHKTTFSAFEPSYSLPNNVA
LLTLQELENGEVLLRLAHLFEVGEDSEYSVMTKVELKKLFNNKKISKVKETSLSGNQEKA
EMEKRRLVWKVEGSAGEEVKRGEAVDEEELVVELAPMEIRTFLIRFDDHIELVGEERATT
T
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaaatgtttccactcctttcctctccatcttctcctggcgacgatcgtgatc
ggcgtcgtcagctccgagtacatagagtacaacacagcaccgagaatcgtccctgagaaa
atcaatgttcacttggttcctcactcccacgacgacgtcggatggctcaagaccgttgac
cagtactacgtcggcgccaataactccattcggggagcttgtgttgagaatgtaatcgaa
tctgtcatcgcttcgttgctggacgatcaaaatagaaagttcatctatgttgagatggcg
ttctttgaaagatggtggaggcaacaaagcaatgccaagaaggttaaggtgaagaagctt
gttgactctggtcaacttgagttcataaatggtggaatgtgtatgcacgatgaggcgact
ccgcattatattgacatgattgatcagacaacactaggccatcagtttatcaaaagtgag
tttggtcaggttcctagagtcggttggcaaatcgatccgtttggacattctgcggtacaa
gcttacttgcttggtgcggagttaggctttgactcgctgtttttcgctagaattgactac
caagatcgtgcaaagagattaagagagaagacacttgaggttatttggcaaggttccaag
tccctagcctcatcttcacagatattcaccggagtattcccaagacattatgaccctcct
gatggtttcacatttgagataaatgatgtatcacctcctatccaggatgatcctagcctt
tttgacttcaatgttcaagagcgtgtcaacgactttgtagctgcagcccttgcacaggtc
aatgtaaccaggacaaatcatatcatgtggttaatgggaactgacttccggtaccagtat
gcatattcatggtacagacagatggacaagtttattcattatgttaacaaggatgggcgt
ctaaatgttctgtattcgacaccatctatctacaccgatgcaaaatatgctgcaaacgag
tcgtggcccctcaagactgatgatttcttcccgtatgcggacaaacctaatgcatactgg
acagggtactttacgagcaggccagcgtttaaaagatatgtgagggatctaagcggttac
tatctggcagctcgacaattggaattcttgagaggtaggagcagttcaggaccaacaact
gatatgttagctgatgctttggcaattgcgcaacaccatgatgcagttagtggtacacaa
agacagcatgtggctgcagattatgctcttagactctcaatgggttacctgcaggccgag
aagttggttgcctcttccctttcctttttatcagcatcaaaatcaagtactgatgagaag
aatcccgacacaaaatttcagcagtgtcccttgcttaatattagttactgtccagcatct
gaagctcgtttgtccagcggcaaaagcctggtggttgttgtgtacaattctctaggatgg
aaacgggaggaagttgtccgagttcctgtgtcgtctgaaaatgttatcgtgaaagatgcg
tctgggaaagaagtcgtgtcgcagattctacctctttcagacatcacactgagaataaga
aaggaatatgtcaaagcatatcttggaagatcaccaaaggatacttctaaacatgtgctt
gcatttatagcttcagtaccacctcttgggttcagctcgtatgtcatctcagaaactgga
cgaacagggcgtggactatctgcgtcatatgttacttctggaagcttgaatcaagatgta
gaagttggccaaggaaatctgaagttactctattcagaagagggtgtgaaaatgagtcgt
tatttaagtaccaaaagtcaggttactgcagaacaaacatatgcttattacattggaagc
aatggaactgacaaggatccacaggcttctggagcttacgtttttcgaccagatggttca
cgtccaattaaatctgaaggacaggctcaattgactgttgttcggggacctttgtttgat
gaagtgcaccaagagtttaactcctggatatcacagattaccagagtgtacaagggaaaa
gaacatgctgaaattgagttcactgttgggcctatcccagctgatgatggtaatagcaag
gaggttatcactaaacttacaaccaccatgaagacaaatggaacattttacacagactct
aacggtcgagacttcatcaaacgggttagggacttcagaacagattgggacttgcaagtg
taccaaccagttgctgggaactattatcctataaatcttgggatatacatgcaagataaa
acttcagagctatcggtgttggtagatcgcgctgtggggggatccagcttagaggacggc
cagatcgagttgatgcttcatcggagaatgcttcatgatgacattagaggtgttggcgag
attcttaacgaaaccgtctgtctccctgatggatgcaaaggattgacgatacgagggaag
ttttacgtacagatagacaaacctggagatggtgcaagatggcgtcgaacatttggtcaa
gaaatatattctccactgcttctggcattcacggaacaggaaggagatcattggattaat
tcacataagacgacattctcagcgtttgaaccgtcatactcattaccaaataacgtcgca
ttactcaccctccaggagttggaaaatggggaagttcttttaaggcttgctcacttgttc
gaggttggggaggatagtgagtactcagtcatgacaaaagtagagctaaagaaactattc
aacaacaaaaagataagcaaagtgaaagagacaagtctctcagggaaccaagagaaagcg
gaaatggagaagagaaggctagtctggaaagtagaaggctcggcaggggaagaagtgaag
agaggagaagctgtggacgaggaagagctagtggttgagcttgctccaatggaaatccga
accttcttgatcaggtttgatgatcacattgaattggttggtgaagagagagcaacaaca
acatag
DBGET
integrated database retrieval system
