Brassica napus (rape): 106349479
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Entry
106349479 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106349479
KO
K14311
nuclear pore complex protein Nup188
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106349479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106349479
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106349479
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
106349479
NCBI-ProteinID:
XP_013644901
LinkDB
All DBs
AA seq
1959 aa
AA seq
DB search
MANPKSVDPSLWWDSFGSLLSSLENASLSHELPQPIAEKLEENHAWFVNTLSMFKPPSGK
SKDALDSDLVQIKQHRLVIKPHLKLKALRISSHLNLDEIQSYILVERCTDQEYGSSDSLS
QHLLDMILLQYYIERQCLLKCTKRILTHALYTSREQSTIRDAAVKLISDGLEKQQSSLLE
NLFSSSFPQHMDVNLFTLWAEETLIEDNLVLDILLLLYHESFHTCNGERWRTLCSLYKGI
LLGSYSFWKLAVSAEAQHSACRVKIQLLMILIDTLDMENLLQMVHDGLPFRSGPCVFSII
DVQEMDATISSLNTLEVKEAGPLVLAWAVFLCLISSLPGKEEIPFLMEIDHVSYVHQAFE
AASLSYFLDVLQSNVLNDFDGPISGFRSVLRTFISAFIASYEINIQLEDANLELILEILC
KVYQGEESLCSQFWDRKSSVDGPIRCLLFDLESEFPFRSVEFIRLLSSLSEGSWPAECVY
NFLDKSVGISTLFDITSDSVVDGASQLVETSQPLQIPGLEGLVIPRNTRGRILRVINENT
GLVRWEYSLSGATLLIIHLANVLYTGNNREAFVILELVRRMVTFNKAVCFSLLNISHFFH
VNESYMNEKLESDVRVVDIICNSVRSLTFDSSGVAMMAMAIDILAKLLRCSPSNVAPMVL
KANIFDMTSGPGVPDSGFNISLSGSWSLSGKLAKMILIDCEKNDTSCPLVISVLEFTMQL
VEGGVENDLVLALIVFSLQYVLVSHESWKYNHGHMRWNVTLKVIEVMKTCLRFSKFSAKL
KDVLLDILLNDASVHNALFRIICTTAHTLENLRVHRFIEPAEIEGWQLSIVSVLDVLDIT
LSQSSQSTDSGLPVFHQTMLSSTSKPIPVVAAITSLISYFRNPTIQICAAKVLSKLYAMA
ESSQLYIISKAGFGLDDKQITDLRTSVSQIILDPSEPNEDLVIATMKLLTVAARYQPALL
VALFDSNEDSDAGKLKQSDKETSSGPELACKSRLLHIILQHVERATDFVNRYPDILLSLL
GFLKTLWQEAGQYANLLEPFKASNRLWQEFSNIISQVSKLKDSSVGRLDNEEMSKLYVKY
QCQSSVLEILACNMFLNKKLLFAESLKKSWLEQKEKTKNAVSPSKLSLTAASDPKDIFSK
WCDVSVLDGLIQSVSSLDGEIEINVQSKVAAVLLIVHLIVKLETSGAGALSMSLVGKIKV
ISEMLCAQPAFSELLAQYSKLGYSGGKELMPMILSDLNCHLQGKLEGRDIPTGPFKELFQ
FLVESGFWEKYKQSTDIDKNMALGDNILFDIQHIRTELGTAIWDFSEWKTSKATTEEMLS
YMQRANSMVLISTSQVSALHALTSVLILYEDNSLEDSVAVERKVPARVTLSSIDEVCKKF
SSRVDSLASLWDAPKIVFDILTAQADLLSSLLKSGKKNLPSSVCALVLRNVGPGLKILGS
LRHSNAILKKTVNLLLEVLLLVVGSGSDSSNSSEMGHMAARDLAEISDATIGLLPLLCNF
MGNPEYLTLCLTTVDLILRNFLTPETWFPIIQSHLRLQHVILQLQDKKSSASVSAIMKFF
LTIAQVHDGAQMLLNSGFFSTLRALFIDLPDGISTLVSDDEKGGQLDKKEKPQHMWGLGL
AVVTAMVNSLGSVSVGADIVESVISYFFSEKGYMISYYLSAPDFPSDDREKVRARTQRTW
TSLAYLRETEHTLLLMCALASHWRSWVKIMKEMDSPLREMAIHLLAFISKGAQRLRESHI
ITSHLLCPPVVKEEFDSCKRQSVINSKHGWFALVPLVCVGKPKLGAVSISTALVVRGQTT
EQPGSVPQSHFTDSVAVQIYRVASLLLNFLCLQAEGVVKRAEEVGYVDLAHFPELPEPEI
LHGLQDQATAIVAELCDNYKEVPNEVKKLCLLLLQITEKSLYLELCVVQVCRIHQVFGRV
DNFSKDFKKLVKAAEAHAYLEPSMDSLKKIAVFLYPGLL
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccctaaatcggtcgatccgtcgctatggtgggattcctttggatctcttctg
agctcgctcgagaatgcatctctctctcatgaacttccacagcccatcgcggagaagttg
gaggaaaaccacgcgtggttcgttaacacgctgtcgatgttcaaaccaccgagtggtaaa
tcaaaagacgctttggattcggatctagtccagattaagcagcaccgcttggtgattaag
ccccacctcaaactaaaagcccttcgaatcagctctcatctgaatctagatgaaatccaa
tcatacatcctcgtcgaaagatgtacggatcaggaatatggatcatctgactctctatct
caacatctccttgacatgatattgcttcagtattacatagagcgccagtgcctactcaag
tgtacaaagcgtatcctcacccatgctttatatacatcaagagagcaaagtactattagg
gacgcagctgttaagcttatctcggatggccttgaaaaacaacaatcgtcacttcttgag
aaccttttctcctcttcttttccacagcacatggatgtcaatctatttactttgtgggcg
gaggagacactgattgaggacaatttggtgttggatattcttttacttctttaccatgaa
tcatttcacacttgtaatggagaaagatggaggactctgtgttccttatacaagggaatt
cttctgggctcctatagcttttggaagctggcggtgtcagctgaagcacaacattctgca
tgccgtgttaaaattcagttgttgatgattcttatcgacacgctggatatggagaatttg
ttacaaatggttcatgacggattgcctttcaggtctggcccttgtgttttttccattatt
gatgtccaagagatggatgcaacaatctctagcctcaacactctcgaagtaaaagaagca
ggacctctagtccttgcatgggcagtatttctgtgtcttatttcatcactccctgggaag
gaggaaattcctttcctgatggagatagatcacgtgagctatgttcatcaagcttttgag
gcagcatcattgagctatttccttgacgttcttcaaagtaatgtgttgaatgatttcgat
ggcccaatctctggttttcgtagtgtcttgaggacttttatttcagcatttattgcgtct
tatgagatcaatattcagctggaagatgccaatctggagttaatactggaaatcctttgc
aaggtttaccaaggagaggagtccctctgtagtcagttttgggatcgaaaaagttctgtt
gatggccctatccggtgtcttctttttgatttggagagtgaattcccgttcagaagtgtg
gaattcattcgtctcttgtcgtccctgagtgaaggaagttggcctgccgaatgtgtatac
aactttctggataaatcagtcgggatatcaactttatttgatattactagtgactctgta
gtagatggtgcttcccagcttgttgaaacttcccagccgttgcaaattccaggtcttgaa
ggtttagttattcccaggaatactcgtgggcgaattttgagagtaatcaatgaaaacact
ggccttgtgcggtgggagtattcactctccggcgctacactgttgatcatccatttggcc
aatgtactctacactggtaacaatcgtgaagcttttgtgattctcgagctggttcgtcga
atggtaacatttaacaaggccgtatgtttctccttactgaatatcagtcacttctttcat
gttaatgaatcttacatgaatgagaagctggaaagtgatgtgagagtggttgacataatt
tgcaattcagtcagaagcttgacttttgactctagcggtgtagctatgatggcaatggct
attgatatcttagctaagctgttgcgatgttccccatcaaatgttgctcccatggtttta
aaggcaaatatatttgacatgacttcagggccaggcgtcccagacagtggattcaatatt
tcgttgagtggatcttggtcgctctccgggaaactggcaaaaatgatcttgattgattgc
gagaagaatgatactagctgcccattggtcatatcagttctggaattcaccatgcagctt
gtggagggaggagtggagaatgacttagtacttgctctaattgttttctcgttgcagtat
gttcttgttagtcatgagtcttggaaatacaatcatgggcatatgcgttggaatgtgaca
ctaaaggtcattgaagtgatgaaaacgtgtctcagattcagtaaattttccgccaagctg
aaggatgttctccttgatatcttgcttaacgatgcctctgttcacaatgctctcttccga
atcatttgtacgactgcacatactttagagaaccttcgtgtacaccgttttattgaacca
gcagagattgaaggatggcaactttcgatagtctctgttttggatgttttagacatcacg
ctctcccagtcttctcagagcacagattctggtcttcccgtgtttcatcaaactatgctg
tcgtctacatctaaaccaatcccagtcgtggcagctatcacatcgttgatatcttacttc
cggaatcctactatccagatttgtgctgctaaagtgctttcaaagttatatgccatggca
gaatcatcacaactctatataataagcaaagcaggctttggtctagacgataaacagatc
acagatttaagaacttcggttagccagatcatacttgatccatcggaaccaaatgaagat
ctagtcattgccacgatgaaactactaactgttgcggcaagatatcagcctgctctttta
gttgccctatttgattcaaacgaagactcagatgctggtaaattaaaacagtcagacaaa
gagacttcctcaggtcctgaattggcttgtaaatctcgattattgcacattatcctgcag
catgttgagagagcaactgattttgtcaatagatacccggatatattactgagtttactt
ggttttctcaaaaccctttggcaagaggctggccaatacgcgaatttgttggaaccattt
aaggcgtcaaacaggttgtggcaggaattttccaacatcatatcccaggtgtctaagcta
aaggattcgtcagttggaagattagacaacgaagaaatgtctaagttgtatgtgaaatat
cagtgtcagtcttctgttttggaaattctggcgtgcaacatgtttttgaacaagaaattg
ttgtttgcggagtcgcttaaaaaatcatggttggagcagaaagagaagacaaagaacgct
gtctcaccatctaaattatctctgacagctgcttcagatcccaaggatatcttttcaaaa
tggtgtgatgtgtctgttttagatggccttatccagtcagtttcatctttagatggtgaa
attgaaataaacgtacaatcaaaggttgccgccgttttacttattgtgcatttgattgtg
aaactggaaacatctggcgcaggagcattgtctatgtctttagttgggaagatcaaagtc
atttcagaaatgctttgtgcccaacctgctttttctgagttgttagcacaatattcaaag
cttggttatagtggagggaaggagctgatgcctatgattctcagcgacctaaactgtcat
ctgcaagggaaacttgagggtcgtgatatcccaactggtccattcaaagagcttttccag
tttctagttgagtcgggattttgggagaaatacaaacagagtactgatatagacaaaaat
atggctttgggggacaatattttgtttgacattcagcacatacgaacagaattaggtact
gctatttgggatttttccgagtggaagacatctaaagcaacgacagaggaaatgctgagt
tacatgcagagagcaaactcgatggttttaatctcaacttcgcaggtctctgctttgcat
gcactgacatccgtcttgattctttacgaggataattctcttgaagacagtgtggctgta
gaaaggaaagtccctgctcgggtcactctttcaagcattgatgaagtgtgcaaaaaattc
tcctccagggttgattcacttgcctctctctgggacgcccccaagattgtgttcgatata
ctcacagcacaagcagacttgctatccagccttttgaaatccggaaagaaaaatctgcca
tcatctgtttgtgcacttgtcctgagaaatgttgggcctggtcttaaaatcctcggtagt
ttgaggcattcaaatgctatattaaagaagacggtaaacctcctgcttgaggtgctgctt
ctggttgtgggttctggttcagacagctcaaactcaagtgagatgggacatatggcagcc
agagatcttgcagaaatatctgatgcgacaattggattattaccccttctctgcaacttc
atggggaatcccgagtacttgactctctgcctgaccacggtagacttgattctcagaaat
tttttgacgccagagacatggttcccaattatacagagtcatctccgcttgcagcatgtt
atactgcagcttcaggataagaaatcctcggcatccgtttcagcaataatgaagtttttc
ttaactattgctcaagttcatgacggtgctcagatgcttctcaattccggatttttctcg
actctaagagctttgttcattgacttgccagatggaatatctactttggtatctgacgat
gaaaagggcgggcagctagataagaaagaaaaaccgcagcatatgtggggactcggtttg
gctgtggttacggcgatggttaattctctaggatccgtttctgtgggtgcggatatcgtg
gagagtgtaatatcttactttttctcagagaaaggttacatgatctcttattatctgtct
gcgcctgatttcccttctgatgatcgtgaaaaagtgagagcaagaactcaacggacatgg
acatcccttgcttatctgagagaaaccgagcatactctccttctgatgtgtgcattagca
agccactggagatcatgggttaagattatgaaggagatggattctccattaagagaaatg
gctatacatctcttggcctttatcagcaaaggcgctcaacgcctgagagagtctcatatc
ataacatctcatctgttatgccctccagtagtgaaagaagagtttgattcctgcaaaaga
cagtcggtaatcaacagcaaacacggatggtttgctctagtaccgttagtttgtgtcggg
aaacccaagctcggtgctgtatcaatctcgactgctctagttgttaggggccaaacgaca
gagcaacctggatctgttcctcagtcacactttacagactcggttgcggtacagatttat
agagtggcttctctcttgttgaattttctatgcttacaagcagaaggtgttgttaaacgg
gcagaggaagtgggatatgtagatcttgctcatttccctgagcttccagagccggagatt
ttgcacggtctacaggaccaagccacagcgattgtcgctgagctttgtgataattacaaa
gaggttcctaatgaagtcaagaagctgtgcctcctgttgctccaaataacagagaagtcg
ttatatttggaactctgtgtagttcaggtttgcaggatccatcaagtctttggccgggtg
gataacttctcaaaagacttcaaaaagctagtgaaagctgcagaagcgcatgcgtacttg
gaaccgtctatggattcactgaagaaaatagctgtgtttctgtatcctggattgctatag
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integrated database retrieval system
