Brassica napus (rape): 106350091
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Entry
106350091 CDS
T04128
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
bna
Brassica napus (rape)
Pathway
bna03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106350091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106350091
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
106350091
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106350091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
106350091
NCBI-ProteinID:
XP_013642363
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Position
A6:9506412..9508215
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AA seq
357 aa
AA seq
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MKRPRPPSPPSISAAAKPPLSPPPTPILKQKLQRTGAPKWLPLKLTQTELTLPLTFPTGQ
TFRWKQTGPVQYSGSIGPHLVSLRQRPGDETVSYCLHRSATSPNAAELALLDFLNAEISL
AELWSDFEMKDPRFGEVARHLRGARVLRQDPLECLIQFLCSSNNNIARITKMVDFVSSLG
LYLGEVEGFEFHQFPSLERLSRVSEDELRKAGFGYRAKYITGTVSALQSKPGGGDEWLLS
LRKLDLQDAIAALCTLPGVGPKVAACIALFSLDQHSAIPVDTHVWQIATRYLVPDLAGAK
LTNKLCSRVAEAFVSKYGEYAGWAQTLLFIAELPAQKALLQSFSQPIQLVKSAEKKK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacctcgacccccatctccaccgtcgatctccgccgccgcaaaaccaccactt
tctcctccccctactccgattctcaaacagaagctacaaagaacaggagcaccaaagtgg
ctcccactaaaacttacccaaacggagctcacactaccgttaacattcccgacgggtcaa
acattccggtggaaacaaaccggaccggttcagtacagcggatcgatcggtcctcacctc
gtctctctccgccagcgtccaggagacgagacggtttcctactgcctccaccgcagcgct
acaagccctaacgccgcagagctcgcgcttctcgatttcctcaacgcggagatctcgcta
gccgagctgtggtccgatttcgagatgaaggatcctcgtttcggagaggtggcgaggcat
ctccgcggggcgcgtgtgctgaggcaggatccgttggagtgtttgattcagtttttgtgc
tcgtcgaacaacaacatcgcgaggattacgaagatggtggacttcgtgtcgtctttgggg
ttgtatctgggtgaggttgaggggtttgagtttcatcagttcccttcgttggaaaggttg
tctagggtttctgaggatgagcttagaaaggctggttttggatacagagcgaagtacata
acaggtactgtaagtgcgttgcagtcgaagccaggtggtggagatgaatggcttctgtct
ctacgcaaactggatctccaagatgcgattgctgctctgtgtacgttgcctggtgttggt
ccgaaggtagcagcttgcatagctctgttttcacttgatcagcatagtgccattcccgtt
gacacgcatgtctggcagatagccacaaggtaccttgtgccagaccttgccggtgccaaa
ctgacaaataaactctgcagcagagtggcagaagcatttgtgagtaaatatggggaatat
gctggttgggctcagacattgctcttcattgctgagttacccgcacagaaagctctcttg
cagtccttttcacagcccatccaactggttaaatctgcggaaaagaaaaagtaa
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