Brassica napus (rape): 106350529
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Entry
106350529 CDS
T04128
Name
(RefSeq) biotin carboxylase, chloroplastic-like
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00620
Pyruvate metabolism
bna00640
Propanoate metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01212
Fatty acid metabolism
Module
bna_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
106350529
00640 Propanoate metabolism
106350529
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106350529
Enzymes [BR:
bna01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
106350529
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
106350529
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
106350529
NCBI-ProteinID:
NP_001303080
UniProt:
Q93Y50
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Position
C5:4242556..4246766
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AA seq
535 aa
AA seq
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MDASMITNCKSTASLPSLFLGRSGGSLRSSQCNVMMGKTITFPSQKTQTLKVSRKNLNRR
CGGGALGATCSGDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAVC
IGEAPSNQSYLVIPNVLSAAISRGCTMLHPGYGFHSENALFVEMCREHRINFIGPNPDSI
RVMGDKSTARETMKNAGVPTVPGSDGLLKSTEEGVKLANEIGFPVMIKATAGGGGRGMRL
ANEPSEFVKLLQAAKSEAAAAFGNDGVYLEKYVQNPRHIEFQILADKFGNVVHFGERDCS
IQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYVGVGTVEFLLDERGSFYFMEMN
TRIQVEHPVTEMIYSVDLIEEQIRVAMGEKLRYTQDEIVLRGHSIECRINAEDPFKGFRP
GPGRITAYLPSGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALNDT
IITGVPTTIEYHKLILEVEDFKNGKVDTAFIPKHEEELAEPHEIVLVKDLTNAAA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctcaatgattactaattgcaaatccactgcctcccttccctctttgttcctg
gggagatcgggaggtagtcttagaagctcccagtgtaatgtcatgatggggaaaaccatt
accttcccgagccaaaagactcagactttgaaggttagccggaagaacttgaataggagg
tgtggtggtggtgcgcttggtgctacctgcagtggggataagattcttgtggctaacaga
ggtgaaattgctgtccgtgtgatccgaactgctcatgagatggggattccttgtgttgct
gtttactcaaccatcgacaaggatgcattgcatgtcaaattggctgacgaggctgtttgt
attggtgaagctcctagcaaccagtcgtatttggtgataccgaatgttctgtcagctgca
atcagccgaggatgcacaatgcttcatcctggatatggattccattcagagaacgctctt
tttgttgagatgtgcagagagcacaggatcaactttattggaccaaatcctgatagcatc
cgtgtcatgggtgacaaatcaactgccagggagacgatgaagaatgcaggtgtcccaact
gtaccagggagtgatggactattaaagagcacagaagaaggagtcaagctcgccaatgag
attgggttccctgtgatgatcaaggcaacagctggtggtggtggacgtggaatgcgtctt
gctaatgaaccgtcagagtttgtgaaactgctgcaggcagcaaagagtgaggccgcggct
gcttttggaaatgatggagtttatctggagaagtacgtccaaaatccccgccatattgag
ttccagattcttgcagataaatttggaaatgttgtgcacttcggcgagcgtgactgcagc
atccagagacggaaccaaaagttgctggaagaagcaccttctcctgcactgacccctgag
ttgcgaaaagccatgggtgatgcagctgttgcagcagcagcgtcgattggctacgttggt
gttggtaccgtggagttccttttggatgagagaggttccttctatttcatggagatgaac
actagaatccaggtggagcatcctgtgacagagatgatttactctgttgatttgattgaa
gaacagattcgtgttgcaatgggagagaaactgcgttatacacaggatgagattgtgcta
agaggacactctattgaatgccgtatcaatgcagaggacccattcaaaggattcagacct
ggacctggaagaataacagcatatctgccatctggaggtccttttgttagaatggatagt
catgtgtatcccgactatgttgttcctccaagctatgactctcttcttggaaagcttatt
gtatgggctccaacgagggaaagggcaattgagcggatgaaacgtgcacttaatgacact
attattacaggggttcccaccaccattgagtaccacaaacttatccttgaagttgaggat
ttcaagaacggaaaagttgacactgctttcatccccaagcatgaggaggaattagcagag
cctcatgaaattgtgctagtgaaagatttgacaaacgcagctgcttag
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