Brassica napus (rape): 106350560
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Entry
106350560 CDS
T04128
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106350560
04121 Ubiquitin system [BR:
bna04121
]
106350560
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106350560
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
106350560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
106350560
NCBI-ProteinID:
XP_048613902
LinkDB
All DBs
Position
C5:complement(4221280..4225521)
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AA seq
1119 aa
AA seq
DB search
MSSQVRRDRRHQSSQQTWVPRGASTPVAVVNEPSHPSANNTAGVSETVGLGAASRPVYPQ
RQHNGSVRPSYNQHQRNNNVAATPPPPNRQRRNNIAPGATLPDDNRQRVGSRTRPVYQGK
RVAKEDNIALTDPNLPQLVQEIQEKLVKSSIECMICYDKVGRAANIWSCSSCYSIFHMHC
IKKWARAPTSIDLLAEKNQGDNWRCPGCQSVQLTSPKEICYRCFCGKRKDPPSDPYLTPH
SCGEPCGKPLEKEFAAAAETTTSEDLCPHICVLQCHPGPCPPCKAFAPPRSCPCGKKTVH
TRCSERRSLLVCGQRCEKLLNCGRHQCEKTCHVGPCDPCQVLVNATCFCKKKVETVICGD
MNVKGELKVEDGVYSCNLNCGKPLGCGNHFCSEVCHPGPCGDCDLLPSRVKTCYCGKTRL
EEQTRQSCLDPIPSCSNLCSKLLPCGLHTCNELCHSGDCPPCLVQVNQKCRCGSTSRTVE
CYITTSSETDKFVCSKPCGRKKNCGRHRCSERCCPLLNAKKNDLSGDWDEHVCQLPCGKK
LRCGQHSCESLCHSGHCPPCLEMIFTDLTCACGNTSIPPPLPCGTPVPSCQLPCSIPQPC
GHSATHGCHFGDCPPCSAPVEKKCVGGHVVLRNIPCGLKDIRCNKICGKTRRCGMHACAR
TCHPEACDTYNESEAALRVTCGQTCSAPRRDCRHTCAALCHPSQPCPDTRCEFPVTITCS
CGRITATVPCDAGGGSTSNLSVDSIYEASVLQKLPTSLQPVESNGSRIPLGQRKLSCDDE
CAKLERKRVLQDAFDITPPNLDSLHFSENAAMTEIISDIYRRDPKWVLAVEERFKYLVLG
KARGSTSTLKVHVFCPMQKDKRDTVRLLAERWKLAVSNAGWEPKRFTVVHVTQKSKPPTR
IIGARGGAVSLGGPHPPSFDPLVDMDPRLVVSLLDLPREANISALVLRFGGECELVWLND
KNALAVFHDHARAATAMRRLDHGSVYHGAVVVQNGQQSPSLGGNAWGKLPSSSSWDVQKA
NPWKKAVIQESDENWGAEDSPIGGSSTDIQAAAWRSATSNNPVVTSVNRWSVLEPETPNT
SGLQPLVRTEGSSSSKAAGKQPVEGSSEEVVDDWEKVCE
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcaagtcaggagagataggcgtcatcagagttctcagcaaacatgggtgcct
agaggtgcttctaccccggtggcggttgtaaatgagccttcccatccttctgctaataat
acagccggagtttcagaaactgttggccttggtgctgcatcacgtcctgtttatccacaa
aggcagcataacggttctgttcgtccgtcttataatcagcaccaaaggaacaataatgtt
gctgctactccacctccacctaatcgacagagaagaaacaatattgctccgggagcaact
ctgcctgatgataatcgtcaacgagttgggtctaggaccaggcctgtgtatcaggggaaa
agggtagctaaggaggataacattgcgttgacagacccgaacttgcctcagcttgttcaa
gagatacaagagaagctggtgaagagttctattgagtgtatgatttgttacgacaaggtt
gggagggctgcgaatatatggtcttgctccagctgttactctatcttccatatgcattgt
atcaagaaatgggctcgagcaccaacttctattgatttgttggctgagaaaaaccaaggt
gataattggaggtgtccaggttgccaatctgtgcagttgacgtcgccaaaagagatatgc
tatcggtgcttttgtgggaagaggaaagatccaccctctgatccatatctgacaccacac
tcatgcggagagccatgtgggaagccgctggagaaagagtttgcagcagcagctgagacg
accaccagtgaggatctttgtcctcatatctgtgtgttgcagtgtcatcctggtccatgt
cctccttgtaaggcgtttgctccgcctcgtagttgcccttgtggtaaaaagacggttcat
actagatgctcggagcggagatctcttcttgtttgtgggcagcgttgcgagaagcttctc
aactgtgggcgtcatcagtgtgaaaagacatgtcatgttggcccttgtgatccttgtcag
gtactagtaaatgccacatgtttctgcaagaaaaaagtggagactgtgatttgcggagat
atgaatgtgaagggagagttaaaagtagaagatggtgtgtattcgtgcaatttgaactgt
gggaagccgcttggatgtggtaatcatttctgttccgaggtttgccaccctggaccttgc
ggagactgtgacttactgcccagtagagttaagacgtgctattgtgggaaaacgcgtcta
gaagaacagaccaggcagagttgcttggacccaattccttcttgctcaaacctatgcagt
aagcttcttccttgtggattacatacttgcaacgagttgtgccattcaggtgattgccct
ccttgtttagtgcaagtcaaccagaaatgccggtgtggttcgacatccaggactgtggaa
tgctacataacaacttcttcagagacggataagtttgtgtgttctaaaccatgtgggcgt
aagaagaattgtgggagacatagatgtagtgagcgttgctgccctctcttgaacgcgaag
aagaatgatctatccggtgattgggacgaacacgtatgccaattaccttgtgggaagaag
ctaaggtgcgggcagcattcctgtgaatctttgtgccatagtggccattgccctccttgc
ctcgagatgatattcactgatctaacatgtgcgtgtggaaatacttcgattcctccacca
ctaccatgcgggacgcctgttcctagctgccagcttccatgctccattcctcagccttgt
ggccattctgctacgcatggatgccattttggagattgccctccttgttctgccccagtg
gaaaagaaatgcgttggtggtcacgtggttctgagaaacataccttgtgggctgaaagac
atcagatgtaacaagatttgtggaaagacgaggcgttgtggcatgcatgcttgtgccaga
acttgccacccggaggcatgtgacacttacaatgaatctgaagcagctctgcgtgttaca
tgtggacagacttgtagtgctcctagaagagattgcaggcacacttgtgcagctctttgc
catccttcgcagccttgccctgacacaagatgtgaatttccagtcacaataacatgttcg
tgtggtcgcataaccgctactgttccttgcgatgcgggaggaggaagtaccagcaatctt
agtgttgattctatctatgaagcctctgttttgcagaagcttccaacttcgcttcagcct
gttgagtcgaatggaagccgaatccctctcgggcagcgaaagctttcgtgtgatgatgag
tgtgctaaactggagcgtaagcgtgttcttcaagacgcgtttgatatcactcccccaaat
ctggactctttacattttagcgagaatgctgctatgacagagattatttcggacatctat
aggcgtgatcctaagtgggtactggctgttgaagagcgcttcaagtacctggtacttggg
aaggctagaggaagcacaagcacccttaaggtccatgtattctgcccgatgcaaaaggat
aaacgagacacggttagacttctagctgagagatggaaacttgcggttagcaatgcaggg
tgggagccaaaacggtttacagtggtccacgtaacacaaaagtcaaaaccgccaacacga
atcattggagctaggggtggcgctgtctcgctaggcgggcctcacccaccgtcctttgat
ccgctggtggatatggatcctaggctggtggtgtcattactggatctcccgagggaggcg
aatatcagcgctttggtgctgagatttggaggtgaatgtgagcttgtttggctgaatgac
aagaacgctttggccgtgttccacgaccatgcccgagccgccactgccatgaggaggctg
gaccacggttctgtataccatggagcagtggtcgtccagaacggtcagcaatctccatca
ctcggtggtaatgcatggggaaaactacctagcagctcatcctgggatgtacagaaagca
aatccatggaagaaagcagtgattcaggagagtgatgagaactggggagctgaagattcc
cccattggaggatcatctacagatattcaagccgctgcgtggagatcagcaacgagcaac
aatccagtggttacctcagttaaccgttggagtgtactggagccagagacgcccaacacg
tccggtttgcagccactggttcggacagaagggagcagcagttcaaaagctgcaggtaaa
caaccggtggaaggctcaagcgaagaagtggtggatgattgggagaaggtatgtgagtga
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