KEGG   Brassica napus (rape): 106350894
Entry
106350894         CDS       T04128                                 
Name
(RefSeq) polygalacturonase At1g48100
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Module
bna_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106350894
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     106350894
SSDB
Motif
Pfam: Glyco_hydro_28 Beta_helix Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 106350894
NCBI-ProteinID: XP_022571017
LinkDB
Position
A6:complement(25172765..25177157)
AA seq 470 aa
MKIIKSSPLLAMLIGFIIIAAAISTISVEGRKHHVKRIKPKHRRHSRDTPTGSPAPAPYP
STHDGVFDILSFGAKGDGISDDSKALIGAWKAACKVVGGKVEIPAGKEFMVKAVTLQGPC
KEETVVQIEGTLVAPTKTGSWPKSSLFQWLNFKWVSHVTIQGSGTLDARGYNWWNLDNYQ
TQKNKYIPPMKPTALRFYSSGNVTVRDISIVNSPLCHLKFDDSDGVKINNITISSPENSP
NTDGIHLQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHISCGPGHGISIGSLGKDETV
ACVSDIIVEDVSIQNTLAGVRIKTWQGGLGVVKNLTFSNIQVTDVQVPIVIDQYYCDKSK
CKNQTSAVSISDVKYNNIVGSFTAQPVRIACSNNVPCMDVDLMDIRLRPSGGIRGLQTHQ
QQHALCWNSYGKTQGPLVPSSIGYCLKKSNIDGYYPKRFIASSHEKLCPL
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgaagataataaagagttcgccgcttttagctatgctgatcggcttcattatcatagca
gccgcaatctccacaatctccgttgagggtcgtaaacatcacgtcaagaggatcaaaccc
aaacaccgtcgtcattctagagatacccctaccggctctcctgcacccgccccttatccg
tccacccatgatggtgtttttgacatcctctccttcggtgccaagggcgatgggatctca
gacgactcaaaggcattgatcggagcgtggaaggcggcttgtaaagtagtcggagggaag
gtggagattccggcagggaaagagtttatggtgaaggcggtgacgctgcaaggaccgtgc
aaggaggaaacggtggttcaaatagaaggaaccttagtagctcctactaagacagggtca
tggcctaagtcaagcttgtttcaatggcttaacttcaaatgggtcagtcacgtcaccatc
caaggctcagggactcttgatgctcgtggctataactggtggaacttagacaattatcaa
actcaaaaaaataagtatatcccaccaatgaaaccaacggcacttaggttttattcaagt
ggtaacgtgacggtccgtgatataagcatcgtgaacagcccattgtgtcacctgaagttt
gatgattctgatggagtcaaaatcaacaacataacgatatcttcgcccgagaatagccct
aacaccgacggcatccacctccagaacacacgtaatgtcgagattcaacactccaacatc
gcttgcggagatgactgtgtatccattcaaaccggctcctccaatgtacacattcaccac
atcagttgtggccctggccatggcatcagcataggaagtctggggaaagatgagaccgtt
gcatgtgtgtctgatatcatagttgaggacgtctcaatacagaacactcttgctggtgtt
cgaatcaagacttggcagggaggattaggggttgtcaagaacctaacattctccaacata
caagtaacagacgtgcaagtaccgatagtaatagaccaatattactgcgataagtccaag
tgtaagaatcagactagcgcagtatcaatttcggacgtcaagtacaacaacatcgtcggt
agtttcacggcacaaccggtacgtattgcatgcagcaacaacgtaccatgcatggacgtg
gatctaatggatattaggttacgaccttccggaggaatcagagggttacaaactcatcaa
cagcaacacgctttgtgttggaactcgtacggcaaaacacaagggcctttggttccttca
agcattggttattgcttaaagaagagtaatattgatggctattatcccaagagatttatt
gcttcgtcccatgaaaaactctgccctttataa

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