Brassica napus (rape): 106351324
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Entry
106351324 CDS
T04128
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106351324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106351324
Spliceosome [BR:
bna03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106351324
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF7787
Motif
Other DBs
NCBI-GeneID:
106351324
NCBI-ProteinID:
XP_022576459
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All DBs
Position
A6:6104043..6105851
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AA seq
484 aa
AA seq
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MAELEDSFLAEIDELSDYEESGFEDNVPNYGEDISMDMSDLETLKSDDDLDTVSKLLRTQ
RYADVMNKVEDALGKDSCGALSEDDPLYKLIVDCNKLTVDIENEIVTVHGFIRSKYRPRF
PELESLVHHAIEYASVVKQIGDEKDLTLVTLKGLSAKSTPLSVLLFASTTKGKPLPEDVL
QKTLEACDRAFELDSALKKILAFVETKMGCIAPNLSAVVGSAVAAKLMATAGGLSGLAKM
PSCNVQVLGQKRKNLDGFSAVTTQSRVGYLEQTEIFRNTPPGFRKQAIKLLAGKSTLAAR
VDACRGDPLGTNGKALREEIQKKIDKLQEPGVARQPKPLPVPDMTAKKKRGGRRLRKMKE
RYAVTEMRKLSNRVAFGVASEESSLGDGLGVGYGMLGQGGSKRLRVSSVPSKLKLGAKLE
KKLKERQYTSGVTTATTSGFMTSRLAFTPVQGIELCNPGAVKLGSGTQSTYFSESGTFSQ
IKKI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacttgaagattctttcctcgcagagatcgacgagttatccgactatgaagaa
tcaggattcgaagacaacgtcccaaactatggagaagatatctccatggacatgtcagac
ttggaaaccctaaagtctgacgatgacctcgacaccgtctctaagctactgagaactcaa
agatacgctgacgtaatgaacaaggtggaagacgctctcggcaaggattcgtgtggagct
ttgtcagaagacgatcctctatacaaactaatcgtggactgcaacaagctcacagtagat
atcgagaacgagatcgtcaccgtccacggctttatccgttccaaatacagacctaggttt
ccagagctggagtcgcttgtgcatcacgcaatcgagtacgctagcgtcgtgaaacagatc
ggggacgagaaggacttaaccctagttactctcaaaggtctctcggcaaaaagtactccc
ttatctgttttactctttgcttcgaccactaaagggaagcctctcccagaagatgtcttg
caaaagacgttagaggcgtgtgatcgagcttttgagcttgattccgcgctgaagaagatt
cttgccttcgttgaaaccaagatgggatgtatagcaccgaatctctcagccgttgtgggg
agtgctgttgcagctaagctcatggcgactgctggaggcttgtcagggcttgctaagatg
ccttcttgtaacgttcaagttcttggtcagaagaggaagaatcttgatggattctctgct
gtaacaacacagtctcgtgtgggttacctggagcagactgagatttttcgaaacactcct
cctggatttaggaagcaagctatcaaactcttggctggaaagtctactctggcagctagg
gttgacgcttgtaggggagacccgttggggactaatggtaaagctctgagggaagagatt
cagaagaagattgacaagttgcaagagcctggtgttgcaaggcagcctaagcctcttcct
gttccagatatgactgctaagaagaagagaggtggtcggcggttaagaaagatgaaggaa
aggtatgcggtgacggagatgaggaagctttccaacagggtggcgtttggtgttgcatct
gaagagagctcgcttggggatgggttaggtgtagggtatgggatgcttgggcaaggtggg
agcaagaggctgagagtttccagtgttcccagcaagctgaaacttggtgctaagctggag
aagaagcttaaagaaagacagtatacaagtggtgttactactgcaaccacttctggtttc
atgacatcaagacttgctttcacacctgtgcagggaatagagctgtgcaatcctggagct
gtgaaattaggtagtgggactcagagcacttacttctctgagtcaggaaccttctcccag
atcaagaagatataa
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