Brassica napus (rape): 106351429
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Entry
106351429 CDS
T04128
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
bna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106351429
09124 Replication and repair
03420 Nucleotide excision repair
106351429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106351429
03400 DNA repair and recombination proteins [BR:
bna03400
]
106351429
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106351429
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106351429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
106351429
NCBI-ProteinID:
XP_013646686
UniProt:
A0A078GNG9
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Position
A6:complement(7406778..7409112)
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AA seq
300 aa
AA seq
DB search
MATVASKLYSDDVSLLVLLLDTNPLFWSNRSTTFSQFLSHVLAFLNAVLGLNQLNRVVVI
ATGYCSCDYIYDSSLTLSGNSESGRTGMPALFGSLLEKLEDFIVKDEELIKEQEHDERIA
SSLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPI
DSCYIGTQNSAFLQQASYITGGVHHAPKQLDGLFQFLTTIFATDLHTRSFVQLPKPVGVD
FRASCFCHKKTIDMGYVCSVCLSIFCEHHKKCSTCGSVFGQSKLDGASTVSDKKRKAPDS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgttgcttctaagctctattcagacgatgttagtcttctagtgttgttactc
gatacgaatcccttgttctggagcaatagatcgactacattctctcagttcctatctcat
gtgcttgcttttctgaacgcggttttggggttgaatcaactgaaccgagttgtagtgata
gctactgggtactgttcgtgtgattacatctatgattcgtctttgacattgagtgggaac
tctgagagtggtagaactggaatgcctgctctttttggctctttgcttgagaagttggaa
gattttattgttaaagatgaggagcttatcaaggagcaggagcatgatgagaggatagct
tcttctctcttgtcaggatcactctccatggctctttgctatatacagagggttttccgt
tctggacatcttcatccccagcctcggattttatgcttgcaaggctcccctgatggccct
gaacaatatgtagctgttatgaactctatcttctctgcccaacgcctaatggtccccatt
gattcctgttacataggtacacagaactcggcgtttttgcagcaggcatcttacataacc
ggcggtgtacatcatgcaccaaaacagttggatgggctgtttcagtttcttacgacgatc
tttgctactgatttgcacacccgtagctttgtacaacttcctaaacccgtaggcgttgat
tttcgagcatcgtgtttttgccacaagaagactatcgatatggggtatgtatgttcggta
tgtctgtccattttctgtgagcatcacaagaaatgttcgacgtgcgggtcagtttttggt
cagtctaagcttgatggtgcttcaactgtcagtgataagaagagaaaagctcctgattct
taa
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