Brassica napus (rape): 106352384
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Entry
106352384 CDS
T04128
Name
(RefSeq) clathrin heavy chain 1 isoform X2
KO
K04646
clathrin heavy chain
Organism
bna
Brassica napus (rape)
Pathway
bna04142
Lysosome
bna04144
Endocytosis
bna05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106352384
04142 Lysosome
106352384
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106352384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106352384
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106352384
Membrane trafficking [BR:
bna04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
106352384
Exosome [BR:
bna04147
]
Exosomal proteins
Proteins found in most exosomes
106352384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
106352384
NCBI-ProteinID:
XP_013647481
LinkDB
All DBs
Position
A1:28052579..28061427
Genome browser
AA seq
1707 aa
AA seq
DB search
MAAANAPITMKEVLTLPSIGINQQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVAFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPDEKWLVLIGIAPGS
PERPQLVKGNMQLFSVNQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL
ETASAIYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDSCIKLFEQFK
SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDTHVHNALGKIIIDS
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDKVLVEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE
EAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLRDGLVSDAIE
SFIRAEDATHFLEVIRATEDANVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIERLGEI
EEFILMPNVANLQTVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLQQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFSELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL
ALRLDHTRVVDIMRKAGQLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGD
HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWINNMIDFAFPYLLQFIREY
SGKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQLLPLALPAPPMPGMGGGPGMGGG
YGPPPQMGGMPGMPPMPPYGMPPMGGY
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcaaacgccccaatcacgatgaaggaggtcctaacgcttccgagcattggg
atcaaccagcaattcatcacgtttacgaatgttactatggagtctgacaagtacatatgt
gtacgagagactgcacctcagaacagcgtcgtgattatagatatgaacatgccgatgcag
cctctaaggagacctataactgctgattctgctcttatgaaccctaactcgaggatcctt
gccttgaaagctcaagttccaggaactactcaggatcatcttcagatatttaacatcgaa
gcaaaagcgaagttgaaatcacatcagatgcctgagcaggttgctttttggaaatggatt
acaccaaagatgttggggctggtcacacaaacttccgtgtatcattggtcgattgaaggt
gattctgagccagttaagatgtttgatagaacggccaatttggcaaacaatcaaattatt
aactataagtgctctcctgatgagaagtggttggtgttgattggaattgctcctggctct
cctgagagaccacaattggtaaaagggaatatgcagctattctctgtaaatcaacagcgg
agccaggcccttgaagcgcatgctgcttcatttgctcagtttaaggtccctgggaatgag
aatccttctattcttatatcctttgcaagcaagagctttaatgctgggcagataacatca
aagttgcatgtcattgagcttggtgcacaaccaggaaaaccatcattttcaaagaagcag
gcagacctctttttccctcctgattttgcagatgactttcctgtagccatgcaggtctca
cacaaatttaacttgatatatgtcatcaccaagcttggcctgttgtttgtatacgatcta
gagacggcttctgctatctacagaaatcggataagtccagacccaattttcttgacttct
gaagcttcttccgttgggggtttctatgccattaataggcgaggacaagttcttttggct
acagtaaacgaggctacgataataccgtttattagcggtcaattgaacaatttggaactt
gctgtcaatctggctaaaagaggaaacctccctggtgcggaaaatctggttgtccagcgg
ttccaagagttatttgctcaaacaaagtacaaggaggctgctgaacttgctgctgaatct
cctcaggggattctacggacacctgatacggtggctaagttccagagtgttcctgtacaa
gcagggcaaactcctcccttgttacagtattttggaacccttttgactagagggaagctc
aattcgtatgagtctttggaactatcccggcttgttgtgaatcaaaacaagaagaacctt
ttggaaaactggttggcagaggataagctagaatgcagtgaagaacttggagaccttgtc
aagactgtggataatgaccttgctctgaaaatatacatcaaagctcgagctactccaaaa
gttgttgcagcttttgcagagcgaagggagtttgataaaatactgatttactcaaagcag
gttgggtacacacctgattacatgtttcttctgcaaacaatactccgtacggatcctcag
ggagcagtaaatttcgctttaatgatgtcccaaatggaaggaggttgtccagttgactac
aacaccataactgatcttttccttcagagaaatctgatccgtgaagcgactgctttcctt
ttggatgttctgaagccaaatttacctgagcatgcttttctacaaactaaggttttggag
atcaatttggtaacctttcccaatgtggctgatgcaattttagcaaatgggatgttcagc
cactatgaccgccctcgggttgctcagctttgtgaaaaggctggactttatatccaatct
ttaaagcattactcagagttacctgatattaaacgtgtaattgtgaacacacatgcaatt
gagccgcaggctcttgtcgagttttttggtactctttccagcgagtgggctatggagtgc
atgaaggatcttctgttggttaacctaagaggcaaccttcagataatcgttcaggcttgc
aaggagtactgtgagcaacttggtgttgattcatgcatcaaactctttgagcagttcaag
tcgtatgaaggactatactttttcctaggttcatatttgagtatgagtgaggatcccgag
attcacttcaagtacattgaagcagctgccaagactggtcaaataaaggaggttgagcgt
gtcactagagagtctaacttttatgatgctgaaaagacgaagaactttttgatggaagct
aagcttcctgatgcccggcctttgataaatgtctgcgaccgttttggctttgtacctgat
ctgacccattacctgtacacaaacaacatgcttcgttacattgaaggttacgttcagaag
gtcaaccctgggaatgctcccttagttgtggggcagttgcttgatgacgaatgccctgaa
gattttataaaaggcctcattctctctgttcgttcattgcttccagtcgaaccccttgtt
gaggaatgtgagaagagaaatcgactccgtctccttactcagttcttggagcatctagtt
agtgagggaagccaagatacgcatgtccacaatgccttgggtaaaattatcatagacagc
aacaacaaccctgagcatttcctgaccaccaacccgtactatgactctaaggttgtgggt
aaatactgcgagaaacgtgatcccaccctggctgttgtggcatacagaagaggacaatgt
gatgaagaactcatcaatgtcaccaacaaaaactctttgttcaagttacaagccaggtac
gtagtggagaggatggatggtgacctctgggacaaggttcttgtggaggaaaatgaatat
agaagacaacttattgaccaagttgtgtctactgctttacccgaaagcaagagcccagag
caagtctctgcagctgttaaagcattcatgactgctgatctcccgcatgagcttatcgaa
cttctggaaaagattgtgcttcaaaactcggccttcagtggaaacttcaatctgcaaaat
ctgcttatactgacagcaatcaaggcagatccgtctagagttatggattacattaacagg
ctagataattttgatggtccggctgttggagaagttgcagttgatgcccaattatatgag
gaagcatttgcgatttttaagaaatttaacttaaatgttcaagctgtcaacgtattgttg
gataacgttagaagcattgagcgtgcagttgaatttgctttccgggtcgaagaggattcc
gtttggagccaagtcgctaaggctcagctcagagatggactagtcagtgatgcaattgag
tctttcattcgtgctgaggatgccactcatttcttggaggtcatacgtgctactgaagat
gctaatgtctatgatgacttggtcagatacctccttatggttagacagaaggtgaaagaa
cccaaggttgatagtgagctcatttatgcttatgcaaagattgaaaggttgggtgagatt
gaagaatttattctgatgccaaacgttgctaacctacaaactgtcggtgatcgcctgtac
gacgaagctctgtatgaggctgcaaaaataatctatgcgttcatttcaaactgggccaag
ttagccgtcactcttgtgaagttgcagcagttccaaggtgctgttgatgctgcaaggaaa
gcaaacagtgcaaagacatggaaggaagtctgctttgcttgtgttgatgcagaggaattc
cggttggctcaaatatgtggacttaacgtcattatacaggtggatgacctggaagaagtc
agcgagttctaccaaaacagaggatgcttcagtgaactaatctcacttatggagagtgga
cttggtctggaacgggctcacatggggatcttcaccgagttgggtgtactgtacgccaga
tatcgttatgagaagcttatggagcacatcaagttgttctccactcgcctcaatattccc
aagcttatacgagcctgtgatgaacaacagcactggcaggaacttacctatctttacatt
cagtatgatgagtttgataatgctgctaccactgtcatgaaccactctcctgaagcatgg
gagcacatgcaattcaaagacattgttgccaaggttgcgaatgttgagctttactacaag
gccgttcacttctacttgcaagagcaccctgatataatcaacgatcttctcaatgtgctt
gctctgcggttagatcacacacgtgtcgtggatattatgcgcaaggctggtcagttgcgc
cttatcaagccctacatggttgcagttcagagcaacaatgtttctgctgtaaatgaagct
ctgaatgagatatacgtagaagaagaagactatgacaggttacgcgagtctatcgatttg
catgacagctttgatcagataggcctcgctcagaagattgagaaacacgagcttgttgaa
atgaggcgtgtggctgcgtatatttacaagaaagctggtagatggaagcaatcaattgct
ttgtcaaagaaagataacatgtacaaggactgtatggaaactgcttcacaatccggcgac
catgaccttgcagaacaacttctcgtttacttcattgaacaggggaagaaggaatgcttt
gccacatgtctctttgtgtgttatgacttaatcagaccagatgttgctctagaacttgct
tggatcaacaacatgattgactttgccttcccgtatctcctccagtttatccgagaatac
tctggcaaagtggacgaactaatcaaggacaagctagaggcacagaaagaagtgaaggcc
aaagagcaggaagagaaggatgtcatgtcccaacagaacatgtacgcgcaactattgcca
ctggctctacctgcgccaccgatgccaggaatgggaggaggtccagggatgggaggcggc
tatggtccgccaccacagatgggaggaatgccaggaatgcctccaatgccaccatatgga
atgcctccgatgggcgggtactaa
DBGET
integrated database retrieval system
