Brassica napus (rape): 106352557
Help
Entry
106352557 CDS
T04128
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106352557
03036 Chromosome and associated proteins [BR:
bna03036
]
106352557
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106352557
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106352557
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106352557
microRNA pathway
RISC loading complex
106352557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
106352557
NCBI-ProteinID:
XP_013647627
UniProt:
A0A816YPR4
LinkDB
All DBs
Position
A7:14829644..14834727
Genome browser
AA seq
957 aa
AA seq
DB search
MSSRGGRGGGGGRRSDQSPGPVAWPALQSSGARGGRGRGNAAPVASSSSSPPSDAVSGAI
GAVDVASSSSVREKPKASASSDSDLSLGQELAEKVQITTAPPSSSKAVTFPVRPGFGQAG
KKVTIRANHFLVQVADRDLYHYDVSISPEVISKKVNRDVMTTLVKTYGESHMAKKIPAYD
GRKSLYTAGPLPFESKEFVVDLNDKKPAASSKRDRKFRVAIKLASRPDLHQLQEFLRRKQ
RDAPYETIQVLDVVLRDLPSQKFVSVGRSFFDPSLGRRGELGDGVEYWSGYFQSLRLTQM
GLSLNIDVSARSFYEPIFVTDFIGKYLNLRDFSRPLRDSDRVKVKKALKSLKVELAQFDF
ARSVKVSGISSCPISELRFTLEDNTQKTVVQYFAEKYNYRVKYPALPAIQSGSDSRPAYF
PMELCRIAEGQRYTKKLNERQVTALLRATCQRPDIRDNSIKGMVKNNKYHEIDLVRKEFG
MSVTDQLATVEARVLPPPLLKYHESGREKMVNPRLGQWNMIDKKMINGARVASWTSVCFS
TRIDRNLPQEFCKQLIDMCVSKGMQFNPQPAIPFISCQPQRIEEALCDIHKRAPGLQMLI
VILPDVTGSYGKIKRICETELGIVSQCCQPNQVRKLNKQYMENVALKINVKTGGRNTVLD
DAIRRRIPLISDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEITKYRGLVSAQTHR
EEIIEDLYKLVQDPQRGPVHTGMIREHLIAFRRATGQKPLRIIFYRDGVSEGQFSQVLLH
EMTAIRKACASLEERYLPPVTFVVVQKRHHTRLFPAQHGNRETTDKSGNIQPGTVVDTKI
CHPTEFDFYLNSHAGIQGTSRPAHYHVLVDENGFTADALQMLTNNLCYTFARCTRSVSIV
PPAYYAHLAAFRARYYMESENSDGGSSRSRNTTASTSAVVSLLPATKDNVKDVMFYC
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcgtggtggtcgcggcggcggtggaggacgtcgatctgaccagtcccccggt
cccgttgcgtggcctgcactgcaaagctccggcgctcgcggcgggagaggtcgcggtaac
gccgctcccgtcgcttcgagctcttcgtctcctccgtcggatgctgtttccggcgccatc
ggagcggttgacgtcgcttcgtcgtcgtccgtacgtgagaaacccaaggcctcggcgtct
tcggattccgatttgtctctcggtcaggagttagcggagaaagtccagatcacgacggct
cctccgtcgtcgtcgaaggcggtgacgtttccggtcaggccagggtttggtcaggcgggg
aagaaagtgacgattcgcgcgaatcacttcctcgttcaagttgcggatagagatctctat
cactacgatgtgtcaataagtcccgaggttatttcgaagaaggtgaacagggacgtgatg
acaacgttggtgaagacctatggagaatcacacatggcgaagaagattcctgcgtatgac
ggcaggaagagtctctacactgctgggcctctcccttttgagtctaaagagtttgttgtg
gatctgaatgataaaaaacctgctgcgtcatccaagagggacaggaagttcagagttgct
ataaagctggcgtcaaggcctgatcttcatcagttgcaggagtttctccgtaggaaacag
agagatgctccatacgagaccatccaagttttggatgttgtactcagggatctgccatcc
caaaagtttgtttccgttgggaggtctttcttcgaccccagtttgggaaggaggggtgag
cttggtgatggtgttgagtactggagcgggtatttccaaagtctaagactcactcagatg
ggactgtctctcaacattgatgtgtctgctagatctttctatgaacctatctttgtcact
gatttcatcggcaagtacctaaatctgagggattttagcaggccactgagggactcggat
cgtgtcaaggtgaagaaagcattgaagagcttaaaagttgaattggcacagtttgacttc
gcaagaagtgtcaaggtcagtgggatttccagctgtcccatcagcgagctaaggttcacg
ttagaggacaacacccaaaaaactgttgtgcaatactttgctgagaagtataattacaga
gtgaaatacccggctctacctgctatccaatcagggagtgactcaaggcctgcttacttc
ccaatggaattatgccggatagctgaaggccagagatacaccaaaaagctgaatgagagg
caggtgactgcgttgctaagagctacctgccaaaggcctgacattagagataattcgatc
aaagggatggtcaagaataataagtatcacgagattgatcttgtgaggaaggagtttgga
atgtcagttactgatcagctagccacagttgaggctcgggtcctacctccacccctgttg
aaataccatgaaagtggcagagaaaaaatggtgaatccaaggctaggacagtggaacatg
attgacaagaaaatgattaatggagcaagagttgcatcttggactagcgtgtgcttctct
actaggattgaccggaatttaccacaagagttttgcaagcaattgattgacatgtgcgtc
agcaaaggaatgcaattcaatccacagcctgctattccgttcatctcttgccagcctcaa
agaattgaggaagcactttgtgatatccacaaaagggcacctggtcttcaaatgttgatt
gtaatattaccggatgtcactgggtcatacgggaagatcaaaaggatatgtgaaacagag
ctagggatagtatcccagtgttgtcaaccaaatcaagttcgtaaactcaacaagcagtac
atggaaaatgtcgcattgaagattaatgtcaagactgggggacggaacacagtccttgat
gatgccattagaagaaggattcctctgattagtgatcgcccaaccataatctttggtgct
gacgtgactcaccctcaacctggagaggactcgagtccttctattgctgcggttgtggcc
tcgatggattggcctgagataaccaagtatcgtgggctggtgtctgctcaaactcatagg
gaagaaatcatcgaggacctgtataagctggtacaggatcctcagcgagggccagtccac
actggtatgataagggaacatctgatcgcattcaggagggctacaggtcaaaaacctctg
aggatcatattctatcgcgatggtgtgagtgaaggacagtttagccaagtgctgttgcat
gagatgactgctatacgcaaggcgtgtgcctctctcgaagagcgttatcttccgcctgta
acgtttgtggtcgtccagaaaagacaccacacacgtttgtttcctgctcaacacgggaac
cgtgagacaactgataagagtgggaacattcagccaggtaccgtcgtcgataccaaaatc
tgtcatcccacggagttcgacttctatttgaacagtcacgctggcattcagggaacaagc
aggcctgcacattaccatgtgcttgtggacgagaacgggttcacagctgatgccttacaa
atgctcaccaacaacctttgttacacgtttgcgaggtgtacgagatctgtttcaattgtg
ccaccggcttactatgcacacttggctgcattcagggctcgttactacatggaaagtgag
aactctgatggaggttcaagcaggagcaggaacacaaccgcaagcacgagtgctgttgtc
tcgcttcttccagcaaccaaggataacgtcaaggacgttatgttctactgctga
DBGET
integrated database retrieval system
