Brassica napus (rape): 106352637
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Entry
106352637 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106352637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106352637
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106352637
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106352637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF1644
Motif
Other DBs
NCBI-GeneID:
106352637
NCBI-ProteinID:
XP_013647716
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All DBs
Position
A7:complement(15586737..15588033)
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AA seq
324 aa
AA seq
DB search
MARFSVSGGDDGEGSSNHQSRKRQRLPSIDEDEETAGSSGEEDEEDDRQIESMSDDSERE
VSIEEARRIAADPVTSKESSLSVTLLDPDVLDCPICCEPLKAPIFQCDNGHLACSLCCTK
VRNICPSCTLPVGYIRCRAMEKVIETSRVSCTNAKYGCKERMLYVNRFSHEKLCVFAPCS
CPVLDCNYTGYYKDLNSHVRAKHKDEVVPFVWDVSVTVRLDKTTILQEEKDGEVMVVQAF
RGLHVVYVVVTCIAPSAREVGCFSYYLVTVPLAVDGSLVQRSMMKNVQKLSNEQPEDGFM
VIPSYMLSGSSRILLGRGRAYGHA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattctcagtttctggaggcgacgacggagaaggatcaagcaaccatcaatcc
cgcaaacgacagcgccttccttccatcgacgaagatgaagaaacagccggaagttccggt
gaagaggacgaagaagacgaccgtcaaattgaatccatgagcgatgacagcgaacgtgaa
gtgtcgatagaagaggcaagacgaattgctgcagatcccgtaacaagcaaagaatcttct
ctttccgtaacgcttttggatccagatgttctcgattgccctatttgctgcgagcccctc
aaggctcccatctttcagtgtgataatggtcatctagcttgttctctgtgctgcaccaaa
gtcaggaacatatgcccgtcctgcacgttacccgtcggttacattcgctgcagagccatg
gagaaggtcatagaaacgtctagagtctcatgtaccaacgccaagtacgggtgtaaggag
agaatgttatacgttaatcgatttagccacgagaagctttgtgttttcgccccgtgctcc
tgccccgtgcttgactgcaactacactggctattacaaggatctcaacagccacgtacgt
gctaagcacaaagacgaggtggttccttttgtgtgggacgtttctgtgaccgttagattg
gataagaccacgatccttcaggaagaaaaggatggggaagtgatggtggttcaagctttc
aggggtttgcacgttgtgtatgtcgttgtgacctgtattgcaccttcggcaagggaagtg
ggatgcttctcgtactatctggtgactgtgcctttagccgtcgatggctcactagtgcag
cgatccatgatgaagaacgttcagaaattgagtaatgaacagccagaagatggtttcatg
gtgattccttcctatatgttgtctggtagttcgcggattttacttggccgtggccgggct
tatggtcatgcctga
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