Brassica napus (rape): 106352717
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Entry
106352717 CDS
T04128
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB1-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
bna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106352717
09124 Replication and repair
03420 Nucleotide excision repair
106352717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106352717
03400 DNA repair and recombination proteins [BR:
bna03400
]
106352717
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106352717
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106352717
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106352717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
106352717
NCBI-ProteinID:
XP_048592908
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All DBs
Position
A7:16262681..16264664
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AA seq
370 aa
AA seq
DB search
MRNREWGLLLMDEVHVVPAQMFRKVISITKSHCKLGLTATLVREDEKITDLNFLIGPKLY
EANWLDLVKGGFIANVLCAEVWCPMTREFFAEYLKKENSKKKQALYVMNPNKFRACEFLI
RFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFL
SKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKIEDRMAGGKEEYNAFFYS
LVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYNSQEEQLSLLAKVLNAG
DDLVGLEQLEEDIDGKALQATRRSRGVMSVMSGAKGLVYQEFNSGHHKSSGQQFKKPKDP
TKRHQLFKTR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacagggagtggggtttgctgctcatggacgaggtgcatgtggttccggcccaa
atgtttaggaaagtcatcagcatcacaaaatctcattgcaagctaggacttacagcaacc
cttgtgagagaagacgaaaagattacagatttgaacttcctcattggcccgaagctatat
gaagccaattggctagatttagttaaaggaggcttcattgcaaatgttctgtgtgctgaa
gtatggtgtcctatgaccagagagttctttgcagaatatctcaagaaagagaactccaag
aaaaaacaggctctttatgtaatgaaccctaacaagttcagagcctgtgagtttcttatt
cgtttccatgaacaacaacgtggggataaaatcattgtcttcgcagacaatctttttgca
cttactgaatatgcaatgaaacttcgcaaaccgatgatttatggtgcaaccagccatatc
gaacgaaccaaaattctagaggcgtttaaaaccagtaaagacgtgaacacagtcttcttg
tcaaaggttggtgataactccatagatatccctgaagctaatgtgattatccagatttcg
tcacatgctggttctagacgtcaagaggctcagcgtttgggtcgtattcttagggccaag
ggtaaaattgaagatagaatggctggtggaaaagaagagtacaatgcattcttctactca
cttgtttctacagatacgcaggaaatgtattattcaacgaaaagacagcagttcttgatc
gaccaaggttatagctttaaagttataacaagtcttccaccacctgatgctggttcaagc
ttaagctacaacagtcaagaagaacagttatcccttctcgcaaaggtgttgaacgctgga
gacgatttggttggcttagagcaactggaagaagatatagacggaaaggccctgcaagct
acgagacgaagcaggggagtgatgagtgtaatgtcaggtgcaaaaggacttgtgtatcag
gaattcaactctggccatcacaaatcttctggtcaacaattcaagaaacctaaagaccct
acaaaacgacaccagctcttcaagacacgataa
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